DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3262 and nubp-1

DIOPT Version :9

Sequence 1:NP_001260688.1 Gene:CG3262 / 35452 FlyBaseID:FBgn0032986 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_492653.2 Gene:nubp-1 / 172868 WormBaseID:WBGene00008664 Length:313 Species:Caenorhabditis elegans


Alignment Length:277 Identity:100/277 - (36%)
Similarity:140/277 - (50%) Gaps:35/277 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RGLPKKQPIIGVQD-------IIVVASGKGGVGKSTVAVNFACSLAK-LGKRVGLLDGDIFGPTI 83
            :|.|....:..:||       .|::.||||||||||:..|.|.:||. ..|:|.:||.||.||:.
 Worm    39 QGPPPDADVPKIQDRFSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQ 103

  Fly    84 PLLMNVHGEPVVNDKN----LMIPPQNYNVKCLSMG-MLTPVETSVIWRGPLVMSAIQRLLKGTD 143
            |.:|.|..|.|.|..:    :.|.|   |:..:|:. :|.....:|||||......|::.||..|
 Worm   104 PRMMGVEDEEVHNSADGWTPVGIQP---NLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVD 165

  Fly   144 WGLLDVLVIDTPPGTGDVHLSLSQH----APITGVILVTTPHTAAVQVTLKGASMYEKLNVPIFG 204
            ||.:|.|:|||||||.|.|:||.|.    .|:.|.::|:||...::....|..|...|..|||.|
 Worm   166 WGEVDYLLIDTPPGTSDEHISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILG 230

  Fly   205 VVENMKYTICQNCNQRLEFF-----------KDSRISSLPRKLISLPLDSRIADSNESGVPVVIK 258
            |||||...:|.||......|           |||.:..|.:    |||:..:|.:.::|......
 Worm   231 VVENMARFVCPNCAHTTLLFPTSTGGAEQMCKDSNLELLAQ----LPLEPALAKALDNGEDFFET 291

  Fly   259 YPDSKYSYLFTQLAEEI 275
            .|||..:..|..|||::
 Worm   292 NPDSTLAKSFLDLAEKV 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3262NP_001260688.1 ParA 37..275 CDD:287566 98/265 (37%)
minD_arch 41..281 CDD:131024 96/256 (38%)
nubp-1NP_492653.2 Mrp 13..282 CDD:223563 92/249 (37%)
ParA 56..308 CDD:287566 96/258 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53899
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100169
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.730

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