DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3262 and nubp2

DIOPT Version :9

Sequence 1:NP_001260688.1 Gene:CG3262 / 35452 FlyBaseID:FBgn0032986 Length:293 Species:Drosophila melanogaster
Sequence 2:XP_012825448.1 Gene:nubp2 / 100125178 XenbaseID:XB-GENE-999229 Length:270 Species:Xenopus tropicalis


Alignment Length:253 Identity:88/253 - (34%)
Similarity:140/253 - (55%) Gaps:16/253 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GVQDIIVVASGKGGVGKSTVAVNFACSLAKLGKRVGLLDGDIFGPTIPLLMNVHGEPVVNDKNLM 101
            |||.||:|.||||||||||::...|.:|...||:||:||.|:.||:||.::|...:.|....:..
 Frog    12 GVQHIILVLSGKGGVGKSTISTEIALALRHAGKKVGILDVDLCGPSIPRMLNAQSKDVHQCDSGW 76

  Fly   102 IP---PQNYNVKCLSMG-MLTPVETSVIWRGPLVMSAIQRLLKGTDWGLLDVLVIDTPPGTGDVH 162
            :|   .|..::..:|:| :|...:.:|:||||...:.|::......||.||.|::||||||.|.|
 Frog    77 VPVYVDQEKSISLMSIGFLLEHPDDAVVWRGPKKNALIKQFASDVAWGDLDFLIVDTPPGTSDEH 141

  Fly   163 L----SLSQHAPITGVILVTTPHTAAVQVTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEF 223
            :    :|....|: |.:|||||...:|....:..:..:|..:.:.|:||||...:|.:|.:....
 Frog   142 IATVDALRPFNPM-GALLVTTPQAVSVGDVRRELTFCKKTGLRVIGIVENMSGYVCPHCTECTNI 205

  Fly   224 FKD------SRISSLPRKLISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEI 275
            |..      :|:|.:| .|..:|||..::.|.|.|...|.::|:|......:.:|.:|
 Frog   206 FSKGGGEELARLSGVP-FLGCVPLDPLLSQSLEQGKDFVQEFPNSAAYPAISSIARQI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3262NP_001260688.1 ParA 37..275 CDD:287566 87/251 (35%)
minD_arch 41..281 CDD:131024 85/249 (34%)
nubp2XP_012825448.1 ParA 12..263 CDD:378455 88/253 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53899
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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