DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir75b

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:721 Identity:146/721 - (20%)
Similarity:259/721 - (35%) Gaps:209/721 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SSLAILALPSLALSDGVCQKERNVYLDDFLQRLHRSNYKSVVFSQTELFFQHIEENLQGANECIS 110
            |.||:||            :.:|::..  .|.||         |..:|....:..|:......:.
  Fly    29 SHLALLA------------QSKNIFTQ--FQPLH---------SDIQLNDDFLNHNILKLGVFLD 70

  Fly   111 LILDEPNQLLN-SLHDRHLGHRLSLFIFYWGARWPPSSRVIRFRE-----PLRVVVVTR-PRKKA 168
            :..|:...:|: :...|...||....|:.....:  |.....|:|     ...|..||. |..|.
  Fly    71 INCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNF--SVLESHFKEAQIFVDADVTYVTHDPFSKN 133

  Fly   169 FRIY--YNQARP-------CSDSQLQLVNWYDGDNLGLQR-IPLLPT--ALSVYANFKGRTFRVP 221
            |.:|  ||:.|.       .:|.::    :.:..|..::| :..|.|  ||....:|.|.|.|..
  Fly   134 FLLYDVYNKGRQLGGELNITADREI----FCNKTNCRVERYLSELYTRSALQHRKSFTGLTMRAT 194

  Fly   222 VFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRT 286
            ..       ||....:....|.|:.::|..:.::.......::....|...::.:||||...   
  Fly   195 AV-------VTALPLNVSIKEIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIFRD--- 249

  Fly   287 QGSMRSEDGKDSNDSFTGG-IGLLQSGQADFFLGDVGLSWER----RKAIEFSFFTLADSGAFAT 346
                |..||     :.||| ||.|...:||..:.....|::|    :...:||.|  .:...|..
  Fly   250 ----RWSDG-----NATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSVF--REICMFRN 303

  Fly   347 HAPRRLNEALA---IMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYI 408
              ||.::..|:   .::||...:|....|.::.:|.:.:    :.:|..||              
  Fly   304 --PRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLW----VTFILERR-------------- 348

  Fly   409 HMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCI---WFTLRLFLKQSCNELHNGYRAKFLTIV 470
                 |:..|.||   ...:||       ....||   |.|.|..          |.|..|..: 
  Fly   349 -----KQWKPSLL---TSCLLS-------FGAGCIQGAWLTPRSM----------GGRMAFFAL- 387

  Fly   471 YWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGY------RLYVE-KESSSLEM 528
              :..:|::.:.|::.:.|:......:..|.|||:|..:.:..|.      |:||| .|...:  
  Fly   388 --MVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDV-- 448

  Fly   529 LENGTELFRQLYALMRQQVI---NDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYG 590
                    |.||   |::|:   ..|...:|.: |||:..:.:                      
  Fly   449 --------RDLY---RKKVLGSKRSPDKIWIPT-EAGVLSVRD---------------------- 479

  Fly   591 SNNFQLSQKLYTRYSAVAVQIGCPFLGS--LNNVLMQLFESGILD-KMTAAEYAKQ--YQE---V 647
                   |:.:...:.||.  |..|:..  |.:.:.:|.|..:.| ..|....||:  |.|   :
  Fly   480 -------QEGFVYITGVAT--GYEFVRKHFLAHQICELNEIPLRDASHTHTVLAKRSPYAELIKL 535

  Fly   648 EATRIYKGSVQAKNSEAYSRTE----SYDSTV------ISPLNLRMLQGAFIALGVGSLAAGVIL 702
            ...|:.:..|..|:..::..|:    .::.||      .:||.:.:|....:.:|        ||
  Fly   536 SELRMLETGVHFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAIILCMG--------IL 592

  Fly   703 LLEIVF 708
            .||:::
  Fly   593 GLEVIW 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 28/126 (22%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 22/101 (22%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/153 (20%)
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 82/399 (21%)
Lig_chan 343..585 CDD:278489 64/328 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462761
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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