DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir76b

DIOPT Version :10

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster


Alignment Length:526 Identity:96/526 - (18%)
Similarity:163/526 - (30%) Gaps:188/526 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PVFHSPPWFWVTYCNN------------------SFEEDEEFNSLDSIEKRKVRV------TGGR 261
            |:..|||...:....|                  .|:.|....:|::|.::|.::      .||:
  Fly    19 PLNDSPPTNLIQMGENGTLSPVTELPMDVDASEAGFDADAPVETLETINRKKPKLREMLDWIGGK 83

  Fly   262 DHRLLML----------------------------LSKHMNFRFKYIEAPGRTQGSMRSEDGKDS 298
            ..|:..|                            |.|..||.::.:.......||        .
  Fly    84 HLRIATLEDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGS--------P 140

  Fly   299 NDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAF--ATHAPRRLNEALAIMRP 361
            :|.....|.::.|...|.....:....::|..:.:|..|| |.|.:  ....||.......::.|
  Fly   141 SDFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTL-DEGEWIMVMQRPRESASGSGLLAP 204

  Fly   362 FKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPR 426
            |:..:|..::::::..|||.|.:|.                                    |:.|
  Fly   205 FEFWVWILILVSLLAVGPIIYALII------------------------------------LRNR 233

  Fly   427 TVLSAHQMPHQLFQKCIWFTLRLFLKQ--SCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTS 489
            ......|.|:.| ..|.||.....:||  :.:.:.:..|..|.|  :||..| :|...|:|.||:
  Fly   234 LTGDGQQTPYSL-GHCAWFVYGALMKQGSTLSPIADSTRLLFAT--WWIFIT-ILTSFYTANLTA 294

  Fly   490 QFARPAREPPINTLQRLQAAMIH------DGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVI 548
            .........|.||:..:.....|      .|....:...:.||.||   ..:.:..||:...:. 
  Fly   295 FLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSML---NRMIQNNYAVFSDET- 355

  Fly   549 NDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNF--------QLSQKLYTRY- 604
            ||.                                :|:|.|...|.        .::..||..| 
  Fly   356 NDT--------------------------------YNLQNYVEKNGYVFVRDRPAINIMLYRDYL 388

  Fly   605 -----SAVAVQIGCPF-----------------LGS-----LNNVLMQLFESGILDKMT-----A 637
                 |....::.|||                 :||     .:..|:.|.||||:..::     :
  Fly   389 YRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPS 453

  Fly   638 AEYAKQ 643
            ||...|
  Fly   454 AEICPQ 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 13/98 (13%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 20/95 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 32/187 (17%)
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 18/117 (15%)
Lig_chan 209..458 CDD:459656 61/324 (19%)

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