DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir40a and Ir75c

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster


Alignment Length:709 Identity:127/709 - (17%)
Similarity:241/709 - (33%) Gaps:216/709 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 CQKERNVYLDDFLQRLHRSNYKSVVFSQ-------TELFFQHIEENLQGANECISLIL------D 114
            |.|...|.......||:..|...:::.:       |:||        :|||..::..:      |
  Fly    81 CDKAELVTNQSSRARLYNQNLHWLLYDEAGNFTKLTQLF--------EGANLSLNADVTYVSRED 137

  Fly   115 EPNQLLNSLHDR--HLGHRLSLFIFYWGARWPPSSRVIRFREPLRVVVVTRPRKKAFRIYYNQAR 177
            |...:|:.::::  |||.:|::.:                                     :|..
  Fly   138 EERFILHDVYNKGSHLGGKLNITV-------------------------------------DQTL 165

  Fly   178 PCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDE 242
            .|:.|..|:..:       |..:.|.| .|....:....|||:....|     |...|:|.||..
  Fly   166 QCNRSHCQVKEY-------LSELHLRP-RLQHRMDLSSVTFRLAALVS-----VLPINSSEEELL 217

  Fly   243 EF-NS-----LDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDS 301
            || ||     :|||.:        ..:||:|...:.:.|:..||..     |:...:      |:
  Fly   218 EFLNSDRDSHMDSISR--------IGNRLIMHTQEILGFKLHYIWC-----GTWSVQ------DA 263

  Fly   302 FTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFAT----HAPRRLN-EALAIMRP 361
            |.|.||:|.:..|:........||.|...:.    .:.:...|..    ..|.... :|...:.|
  Fly   264 FGGAIGMLTNESAELCTTPFVPSWNRLHYLH----PMTEQAQFRAVCMFRTPHNAGIKAAVFLEP 324

  Fly   362 FKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPR 426
            |...:|......:||:|.:.:.|..|    .|.|....::.:..|         ::..|:.....
  Fly   325 FMPSVWFAFAGLLIFAGVLLWMIFHL----ERHWMQRCLDFIPSL---------LSSCLISFGAA 376

  Fly   427 TVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQF 491
            .:..::.||...                      |.|..|:.:   :..::::.:.|::.:.|..
  Fly   377 CIQGSYLMPKSA----------------------GGRLAFIAV---MLTSFLMYNYYTSIVVSTL 416

  Fly   492 ARPAREPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLY----------ALMRQQ 546
            ........|.|:|:|..:.:..|:                .|..|.:.|          :|.:|:
  Fly   417 LGSPVRSNIRTIQQLADSSLDVGF----------------DTVPFTKTYLVSSPRPDIRSLYKQK 465

  Fly   547 VIN--DPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAV 609
            |.:  ||...::...|..|::..:.|             |......|..:...:|.|....    
  Fly   466 VESKRDPNSVWLSPEEGVIRVRDQPG-------------FVYTSEASFMYHFVEKHYLPRE---- 513

  Fly   610 QIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTE--SYD 672
                  :..||.::::. ||.:...:......:|.......|:.:..:.:|.|..:|:|:  ::.
  Fly   514 ------ISDLNEIILRP-ESAVYGMVHLNSTYRQLLTQLQVRMLETGITSKQSRFFSKTKLHTFS 571

  Fly   673 STVISPLNLRMLQGAFIALGVGSLAAGVILLLEIVFIKLDQARLWMLCSRLQWIRYDRK 731
            ::.:..:.:......||:|.|....|.:||:|||             |    |.||.:|
  Fly   572 NSFVIQVGMEYAAPLFISLLVAYFLALLILILEI-------------C----WARYAKK 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 33/127 (26%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 21/98 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 24/152 (16%)
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 43/302 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462759
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.