DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir67a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_648329.3 Gene:Ir67a / 39110 FlyBaseID:FBgn0036010 Length:584 Species:Drosophila melanogaster


Alignment Length:558 Identity:99/558 - (17%)
Similarity:181/558 - (32%) Gaps:189/558 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 ISLILDEP---NQLLNSLH-DRHLGHRLSLFIFY------WGAR---WPPSSRVIRFREPLRVVV 160
            :.|:.:|.   |.:|.|:: |||  |...|.:.:      .|..   ||    |..|.|.:...|
  Fly     8 VLLLFNETSWINPILTSIYKDRH--HETVLLLQHSQHGNASGLERFPWP----VFSFNEQMDFYV 66

  Fly   161 VTRPRKKAFRIYYNQARPCSDSQLQLVNWYDGDNLGLQRIPLL--------PTA----------- 206
            ..:...:...:.:....  ||..|.|....|...|.::::.:|        |||           
  Fly    67 RGKYNSEMLVLIWQTGN--SDWDLDLWQALDRSLLNMRKVRVLLLRKWEKIPTADVAATAEHLLF 129

  Fly   207 LSVYANFKG-RTFRVPVFHSPPWFWV--------TYCNNSFEE-----DEEFNSLDSIEKR---- 253
            |.|....:| |.:|:..:....|..|        ....|.|..     .::|.....:.:.    
  Fly   130 LHVAVIGQGNRIYRLQPYAPQSWLQVDPIESPIFIKIRNYFGRYIVTLPDQFPPRSIVYRNPKTD 194

  Fly   254 KVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFL 318
            ::::| |..::.|:...:..||.|:: :.|                        ::|..:.:..|
  Fly   195 EIQMT-GYVYKFLLEFIRIYNFTFRW-QRP------------------------IVQGERMNLIL 233

  Fly   319 -------GDVGLSWERRKAIEF-SFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTII 375
                   |.:.|      ||.. .|.|.::.|.|:.....   |...||.|..|:|....:..::
  Fly   234 LRNMTLNGTINL------AISLCGFETPSELGVFSDVYDM---EEWYIMVPRAQEISIADVYVVM 289

  Fly   376 FSGP------IFYGIIAL------PYIWRRR--WANSDVEHLGELYIHMTYLKEITPRLLKLKPR 426
            .||.      |||.|..:      |.:.:.|  |:|        |.::...:..|..:...:..|
  Fly   290 VSGNFLIVLIIFYFIFTILDTCFGPLLLKERVDWSN--------LMLNERMISGIMGQSFNMSAR 346

  Fly   427 TVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQF 491
            ..:|:......|      |.|.|                            ||:.:|:|.|.:..
  Fly   347 NTISSKVTNATL------FLLGL----------------------------VLSTLYAAHLKTLL 377

  Fly   492 ARPAREPPINTLQRLQ----AAMIHDGYRLYVEK-------------------ESSSLEMLENGT 533
            .:......|:..::|:    .....:..|.|::.                   |.::|.|..|.:
  Fly   378 TKRPTSQQISNFKQLRDSPVTVFFEEAERFYLKHAWDRPIRYIKDQLNFRETIEYNALRMGLNRS 442

  Fly   534 ELFRQL-----YALMRQQVINDPQGFFIDSVEAGIKLI 566
            ..|..|     ....||::...|    |.:|:..:::|
  Fly   443 NAFSALTSEWMIVAKRQELFKQP----IFTVQPELRVI 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 21/146 (14%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 23/113 (20%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 16/99 (16%)
Ir67aNP_648329.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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