DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir62a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001033986.1 Gene:Ir62a / 3885628 FlyBaseID:FBgn0053971 Length:606 Species:Drosophila melanogaster


Alignment Length:772 Identity:145/772 - (18%)
Similarity:240/772 - (31%) Gaps:262/772 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LPYLLGLLNSTRLTFIGNDESDTAIALTQIVR--GLQQSSLAILALPSLALSDGVCQKERNVYLD 72
            |.:|..|..| |...:..:..|.|..|...:.  |......||..:.||...|       ..|||
  Fly     3 LQFLFALFLS-RYQIVATENFDRAFELALFLDRIGRVHRLHAITIVNSLGSVD-------PSYLD 59

  Fly    73 DFLQRLHR------SN--YKSVVFSQTELFFQHIEENLQGANECISLIL--DEPNQLLNSLHDRH 127
            |    |||      ||  |.....:.|:....|:..:.....|.|.|:.  |..:.::....:|.
  Fly    60 D----LHRGLMCNSSNHFYMLPQMTATDKDSSHVHFSSLQDEETIYLVFARDSKDAVIYLQAERA 120

  Fly   128 LGHRL--SLFI-----------FYWGARWPPSSRVIRFREPLRVVVVTRPRKKAFRIYYNQARPC 179
            .|.|.  ::|:           :::...|.     ::||..| |||..|                
  Fly   121 RGRRYTRTMFLLRKQESQKDIKYFFELLWK-----LQFRSAL-VVVAAR---------------- 163

  Fly   180 SDSQLQLVNWYDGDNLGLQRIPLLPTALSVY-----------ANFKGRTFRVPVFHS-PPWFWVT 232
                    |:|..|.....|: :....||.|           .||:|...|:||... |..||  
  Fly   164 --------NFYQMDPYPTVRV-IRMRRLSSYDPHHVFPPANRKNFRGYRMRLPVQQDVPNTFW-- 217

  Fly   233 YCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMN-----FRFKYIEAPGRTQGSMRS 292
            |.|               .:.|.....|....|:..|..|:|     |||:              
  Fly   218 YKN---------------RRTKAWELAGLGGILINQLMMHLNVTMDLFRFE-------------- 253

  Fly   293 EDGKDSNDSFTGGIGLL-QSGQADFFL-GDVGLS------WERRKAIEFSFFTLADSGAFATHAP 349
                      ..|..|| .:...|..: |.|.||      .:...::::|:.|......|.....
  Fly   254 ----------VNGSSLLNMAALTDLIVKGKVELSPHLYDTLQSNTSVDYSYPTQVAPRCFMIPLD 308

  Fly   350 RRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLK 414
            ..::.:|.:..||...:|..|:..:                               |.:|..|::
  Fly   309 NEISRSLYVFLPFSLTMWLCLLFVL-------------------------------LVVHFVYVR 342

  Fly   415 EITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYR---AKFLTIVYWIAAT 476
            .:.|           ..|          .|..|.:   ....::..|.|   .:|.|.:. :...
  Fly   343 RLIP-----------DGH----------FWAILGV---PGAGQVRYGNRKPVRRFSTFLI-LFGI 382

  Fly   477 YVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLYV-------------EKESSSLEM 528
            ::|...||.:|||.........|.|:|:.|...    .||:.|             ..|..|.:.
  Fly   383 FILGQTYSTKLTSSLTVTLIRRPDNSLEELFLL----PYRILVLPTDVYAIVDSLGHAEQFSTKF 443

  Fly   529 LENGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNN 593
            .....|.|.|....|..:.|     :.|.::                    ...||::||    .
  Fly   444 SCTDAENFSQKRISMHPEYI-----YPISTI--------------------RWRFFDMQQ----R 479

  Fly   594 FQLSQKLYTRYSAVA---------VQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEA 649
            |...::.|  :|.:.         :::......:|:..|:.:.::|:.|......|.|.::    
  Fly   480 FLRKKRFY--FSKICHGSFPYQYQLRVDSHLKDALHRFLLHVQQAGLHDLWLDTCYRKAHR---- 538

  Fly   650 TRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEI 706
                .|.::..::.|    |..:...:.||.|.:|..||.....|.|.:|:..|:||
  Fly   539 ----MGYLKDFSTLA----ELEEKLRLRPLALNLLVPAFSLFLCGMLGSGIAFLVEI 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 26/135 (19%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 16/101 (16%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 26/162 (16%)
Ir62aNP_001033986.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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