DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir64a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster


Alignment Length:592 Identity:101/592 - (17%)
Similarity:176/592 - (29%) Gaps:214/592 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 LLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERRK 329
            |||.:....|:.|..         |..:..|...|..|.|.||.|...:.|.....:....||.|
  Fly   349 LLMAVRDMFNWTFVL---------SRTTSWGYVKNGRFDGMIGALIRNETDIGGAPIFYWLERHK 404

  Fly   330 AIEFSFFTLADSGAFATHAPRRL-NEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIW-- 391
            .|:.:..:.:....|....||.. .:.:..::||..|:|      |:..|   .|::.:..:|  
  Fly   405 WIDVAGRSWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVW------ILIVG---CGVLTVFILWFL 460

  Fly   392 ------------------------RRRW-----------------------ANSDVEHLGELYIH 409
                                    |..:                       :...||...|.|..
  Fly   461 TTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYED 525

  Fly   410 MT-----------------YLKEITPRLLKLKPRTVLSAHQMPHQLF------------------ 439
            .|                 |:|:...:..|...|..|....:   ||                  
  Fly   526 STPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVGLFLESV---LFFVGIICQQGLGFSTSFVS 587

  Fly   440 QKCIWFTLRLF-----------------------LKQSCNELHNGYRAKFLTIVY---WIAATY- 477
            .:||..|..||                       :|...:.:|:..:.....|:|   :...|. 
  Fly   588 GRCIVITSLLFSFCIYQFYSASIVGTLLMEKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKD 652

  Fly   478 -VLADVYSAQLTS---------QFARPAREPPINT-LQRLQAAMIHDGYRLYVEKESSSLEMLEN 531
             |..::|:.::||         ....|....|::| ..:....::|........|::::...|:.
  Fly   653 PVSMELYAKKITSVPTTKENEADEDEPVDPNPVSTDPAKSYRDIVHSHETGAHAKDNAASNWLDP 717

  Fly   532 GTELFRQLYALMRQQVINDPQGF-FIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQ 595
            .|.|.|.|             || |...|.|..|:|||...::.:....|...|..|:       
  Fly   718 ETGLLRHL-------------GFAFHVDVAAAYKIIAETFSEQDICDLTEVSMFPPQK------- 762

  Fly   596 LSQKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSV-QA 659
                     :...:|...|....::..|.::.|:|||                   .|..:| .:
  Fly   763 ---------TVSIMQKNSPMRKVISYGLRRVTETGIL-------------------TYHFNVWHS 799

  Fly   660 KNSEAYSRTESYD-----STVISPLNLRMLQGAFIALGVGSLAAGVILLLEIVFIKLDQARLWML 719
            :......:.|:.|     .||.|.|.:.:...|...:.:|:         ||::.|      |..
  Fly   800 RKPPCVKKIETSDLHVDMDTVSSALLILLFSYAITLMILGT---------EILYSK------WHN 849

  Fly   720 CSRLQWI 726
            ..:|:|:
  Fly   850 RIQLKWV 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 18/72 (25%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 21/94 (22%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 28/142 (20%)
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 27/131 (21%)
Lig_chan 563..828 CDD:278489 53/315 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462930
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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