DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir56d

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster


Alignment Length:657 Identity:118/657 - (17%)
Similarity:193/657 - (29%) Gaps:265/657 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 NECISLILDEPN----------QLLNSLHDRHLGHRLSL------FIFYWGAR------------ 142
            |....|||.|.|          .|||::....:.:|::.      ||||...|            
  Fly     3 NRAAELILRERNIFPTNGSDNITLLNNMFVLEMFYRITQLYHFKNFIFYISERLDLNNKDSQEFF 67

  Fly   143 ---W---PPSSRVIRFRE-------------PLRVVVVTRPRKKAFR--IYYNQARPCSDSQLQL 186
               |   |.:..:|..||             |..|:|.|..:.....  ..:||         |.
  Fly    68 HNFWTYFPMAPNLIITREHHLGIPMMQFISTPSLVMVFTTGKDDPIMELASHNQ---------QG 123

  Fly   187 VNWYDGDNLGLQRIPLLPTALSVYANFKGRTFRVPVFHSP--------------PWFW------- 230
            ::|             |.|...::.:.:.|.|..    :|              .|.|       
  Fly   124 IHW-------------LKTIFVLFPSLQSRDFET----NPESLAQFTAEIKDVYDWVWRKQFINT 171

  Fly   231 --VTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMN---FRFKYIEAPGRTQGSM 290
              :|..:|.|..| .:.:...:.|..|.......|:    .:|:|.   .|...:....|...|.
  Fly   172 FLITIKDNVFILD-PYPTPSIVNKTGVWQAEEFFHK----YAKNMKGYLVRTPILYDMPRVFKSD 231

  Fly   291 RSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNEA 355
            |..:..:.|        .:.....:.|||          .:||...||.|:.|..|.....:...
  Fly   232 RPTNRYEKN--------FIHGTSGNLFLG----------FLEFVNATLMDTSANVTADYLNMTNL 278

  Fly   356 LAIMRPFKQDIWPHLI---------LTIIFSGPIFYGI----IALPYIWRRRWANSDVEHLGELY 407
            |.::   .|.::..||         ..:.:|.||  ||    |.:||                  
  Fly   279 LDLV---SQGVYETLIHSFTEITTKFVVSYSYPI--GINDCCIMVPY------------------ 320

  Fly   408 IHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIW-----FTLRL------------------ 449
                              |....|.|..|:..|:.:|     |||.:                  
  Fly   321 ------------------RNQSPADQYMHEALQENVWVLISLFTLYITVAIYLCSPLRPRDLSAA 367

  Fly   450 FLKQSCNELHN-----------GYRAKFLTIVYWIAATYVLADVYSAQLTSQF--ARPAREPPIN 501
            ||:..|...::           ..|..::.:..|   ..|.:::|.:::||.|  |.|.|:  ||
  Fly   368 FLQSICTLTYSVPTFIIRTPTLRMRYLYILLAIW---GIVTSNLYISRMTSYFTTAPPVRQ--IN 427

  Fly   502 TLQ-----RLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVEA 561
            |:|     .|:..|:...|....:......|...|..:|..:....:.:...|...|:.:.|   
  Fly   428 TVQDVVEANLRIKMLAIEYERMAKSPLQYPESYLNQVDLVDKHMLDLHRDPFNTSFGYTVSS--- 489

  Fly   562 GIKLIAEGGEDKAVLGGRETLFFNVQQYGSNN--FQLSQ-------------------KLYTRYS 605
                      |:       ..|.|:||.....  |:|::                   .:.|.|.
  Fly   490 ----------DR-------WRFLNLQQLHLRKPIFRLTEICEGPFYHVFPLHKDSHMRSVMTEYI 537

  Fly   606 AVAVQIG 612
            .:|.|.|
  Fly   538 MIAQQAG 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 24/147 (16%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 23/106 (22%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 26/143 (18%)
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 23/148 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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