DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir56b

DIOPT Version :10

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001400982.1 Gene:Ir56b / 37250 FlyBaseID:FBgn0034456 Length:425 Species:Drosophila melanogaster


Alignment Length:520 Identity:110/520 - (21%)
Similarity:185/520 - (35%) Gaps:148/520 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 FKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKV---RVTGGRDHRLLMLLSKHMN 274
            |....|.||.|..|....|.:....:......:||:|:.|:.|   .:..|:.:     ||.|  
  Fly    26 FNETQFVVPKFCGPYMEIVKHFAEVYHYQLFLDSLESLPKKSVVEQDIISGKYN-----LSLH-- 83

  Fly   275 FRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSF-FTL 338
                                          |:.:.....:|||           .|.:.|: ..|
  Fly    84 ------------------------------GVIIRPEETSDFF-----------NATQHSYPLEL 107

  Fly   339 ADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHL 403
            ..:......|| .|.:.:.::.|..:.||     |.:|.| .||..:.|.|:..|...|:...: 
  Fly   108 MTNCVMVPLAP-ELPKWMYMVWPLGKYIW-----TCLFLG-TFYVALLLRYVHWREPGNATRSY- 164

  Fly   404 GELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRA-KFL 467
                                 .|.||  |.|...:|...:..:::|        .|...|. .|.
  Fly   165 ---------------------TRNVL--HAMALLMFSANMNMSVKL--------KHASIRVIIFY 198

  Fly   468 TIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLENG 532
            |::|...  ::|.:.:.:.:|:...:|....||:|...|    ||...|:.:  ..|.||.|   
  Fly   199 TLLYIFG--FILTNYHLSHMTAFDMKPVFLRPIDTWSDL----IHSRLRIVI--HDSLLEEL--- 252

  Fly   533 TELFRQLYALMRQQVIN----DPQGFFIDSVEAGIKLIAEGGEDKAVLGGRET-LFFN------V 586
                |.|      .|:|    ||| |...|.:....|:|......|.:..::. ||||      :
  Fly   253 ----RWL------PVVNTSSLDPQ-FDARSXQEYQALLASPSRSYAYVVTQDAWLFFNRQQKVLI 306

  Fly   587 QQYGSNNFQLSQKLY-TRYSAVAVQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEAT 650
            |.|    |.||:..: ..::|:.:.....|..|||..::.::::|:.:..  .|.|.:|.|    
  Fly   307 QPY----FHLSKVCFGGLFNALPMASNASFADSLNKFILNVWQAGLWNYW--EELAFRYAE---- 361

  Fly   651 RIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEIVFIKLDQAR 715
                   ||..::.:     .|:..:.||||.....|:|.|..|...:.:...||:...:..|.|
  Fly   362 -------QAGYAKVF-----LDTYPVEPLNLEFFTTAWIVLSAGIPISSLAFCLELFIHRRKQRR 414

  Fly   716  715
              Fly   415  414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 9/71 (13%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 20/94 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 38/152 (25%)
Ir56bNP_001400982.1 None

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