DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir54a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_611259.2 Gene:Ir54a / 37022 FlyBaseID:FBgn0034272 Length:586 Species:Drosophila melanogaster


Alignment Length:631 Identity:119/631 - (18%)
Similarity:209/631 - (33%) Gaps:159/631 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 VVVTR----PRKKAFRIYYNQARP---CSDSQLQLVNWYDGDNLGLQRIPL---------LPTAL 207
            |::.|    |...|..|:.||..|   .|||:..:       |:.:...||         |...|
  Fly    35 VIMIRIDYCPYNWAKDIFENQTIPVVVLSDSETFI-------NIRMFSRPLHVACLPGHELQKDL 92

  Fly   208 SVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSL-DSIEKRKV-RVTG---GRDHRLLM 267
            ::..||.......|....     :.|.:|:|.:....:.: ::...|:: .:.|   ..:||...
  Fly    93 ALLENFTSSLMDFPSQKK-----IVYISNNFSDPTRMDYIFETCYHRRIWNIVGLLASDEHRYFY 152

  Fly   268 LLSKHMNFRFKYIEAPGRT-------------------QGSMRS---EDGKDSNDSFTGGIGLLQ 310
            ....:.:||.:|......|                   |...||   .|.:.......|.:|   
  Fly   153 RYHLYPSFRTEYRSLESSTIFDKDFPNMHGHPLTVMPDQWLPRSVLYVDRRTGKQILAGSVG--- 214

  Fly   311 SGQADFFLGDVGLSWERRKAIEFSFFTLADSGAF--ATHAPRRLNEALAIMRPFKQDIWPHLILT 373
                .||   ..|||:....::.|  ....:|.|  || |.:.|:|:.::..|....|...:...
  Fly   215 ----RFF---HVLSWKLNATLQLS--KKVTTGRFLNAT-ALKELSESFSVDVPASLTIMERVEQL 269

  Fly   374 IIFSGPIFYGIIALPYIWRRRWANSDVEHL----GELYIHMTYLKEITPRLLKLKPRTVLSAHQM 434
            ...|.|:....:.|.....||....|:..:    ..:::.:..:......|..|:..|......:
  Fly   270 ASTSYPMEVTHVCLMVPVARRIPIKDIYFILSSASNMFLAIVIVSSYGLALNLLRNMTHRDVRLV 334

  Fly   435 PHQLFQKCIWFTLRLFLKQSCN-ELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREP 498
            ...|..|    .||..|.||.| .|...:..:.:.::..|....| :.::.|.|.:..|.|.|:.
  Fly   335 DFVLNDK----ALRGILGQSFNLPLSRSFSTRLIFLMLGIVGLNV-SSIFGAGLDTLMAHPPRQF 394

  Fly   499 PINTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVEAGI 563
            ...:...|:...|             .|...|.....:.:|...|                    
  Fly   395 QARSFAGLRRTKI-------------PLVTTEEDFPTWMKLRVPM-------------------- 426

  Fly   564 KLIAEGGEDKAVLGGRET--LFFNVQQYGSNNFQLSQKLYTR-----------YSAVAVQIGCP- 614
             |:....|...:..||.|  .:|..:.|. |.|...||.:||           :|...:....| 
  Fly   427 -LVVNVSEYNHLRNGRNTSNAYFASRLYW-NLFSEQQKRFTRELFIYSTDDCLWSLALLSFQWPQ 489

  Fly   615 ---FLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEA--TRIYKGSVQAKNSEAYSRTESYDST 674
               |...::.:::::..:|:.|......|   |....|  :.:...|:|.|..|           
  Fly   490 NSLFTEPVSQLILEVNANGLYDFWVGMHY---YDMTAAGLSGLEDPSLQLKERE----------- 540

  Fly   675 VISPLNLRML--QGAFIALGVGSLAAGVILLLEI-------VFIKL 711
              .|.:||::  |..:.|.|...:.|.::.|||:       :|:.|
  Fly   541 --HPTSLRIVDFQWMWQAYGTFMVIAILVFLLEVSWHRITSLFVSL 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 24/148 (16%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/95 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 25/157 (16%)
Ir54aNP_611259.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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