DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir52d

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_611042.2 Gene:Ir52d / 36716 FlyBaseID:FBgn0050464 Length:594 Species:Drosophila melanogaster


Alignment Length:171 Identity:32/171 - (18%)
Similarity:62/171 - (36%) Gaps:70/171 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 LTSQFARPAREPPINTLQRLQ----------------------------AAMIHDGY-------- 515
            ||.:| :..||....||::||                            .||:::.:        
  Fly    90 LTCEF-KAEREENYQTLKKLQMNRRLILLNGNIKPDSVCDFYSKKDQYNIAMVNNNFHQVGIIYA 153

  Fly   516 -RLYVEKESSSLEMLENG---TELFRQLY-ALMRQQVIN---------DPQ-------GF----- 554
             ||:.|:....:.:.|..   .:.||.:. ||::....|         ||:       |:     
  Fly   154 CRLFQERNYEKVYLSEGNPIYVDQFRNMQGALLKSITFNLIPGSMAYRDPKTGQEKHIGYVANLL 218

  Fly   555 --FIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNN 593
              |::.|.|.:.:     :.|....|::|.|:|:.::.|.:
  Fly   219 NNFVEKVNATLDM-----QVKLHKAGKKTSFYNITKWASED 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 29/162 (18%)
Ir52dNP_611042.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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