DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir52a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_611041.2 Gene:Ir52a / 36715 FlyBaseID:FBgn0034023 Length:599 Species:Drosophila melanogaster


Alignment Length:741 Identity:128/741 - (17%)
Similarity:228/741 - (30%) Gaps:264/741 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LQQSSLAILALPS-------------LALSDGV-CQKERNVYLDDFLQRLHRSNYKSVVFSQTEL 93
            |::..::.:.:||             |.||.|. .:.|.|.|....|||..|..|          
  Fly    65 LRKLEISAVTVPSGSTDYDWSFSTAILILSCGYDAENEENSYTLMKLQRTRRLIY---------- 119

  Fly    94 FFQHIEENLQGANECISLILDEPNQLLNSLHDRHLGHRLSLFIFYWGARWPPSSRVIRFREPLRV 158
                :|:|.:..:.|:..          ||.::|                             .:
  Fly   120 ----LEDNSEPESVCMRY----------SLKEQH-----------------------------NI 141

  Fly   159 VVVTRPRKKAFRIYYNQARPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRTFRVPVF 223
            .:|.....::...|       |....|..|:.:|.....|     |..:..:.|.:|.|.|....
  Fly   142 AMVKSDFDQSDTFY-------SCRLFQTPNYVEGHFFKDQ-----PIYIENFQNMRGATIRTVAD 194

  Fly   224 HSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQG 288
            ...|       ......||        :..:.::.|...| ::...::.:|.:..:|:       
  Fly   195 SLVP-------RTILYRDE--------KSGETKMMGYLGH-MINTYAQKLNAKLHFID------- 236

  Fly   289 SMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLN 353
                          |..:|..:....|.      ::|.....::                   :.
  Fly   237 --------------TSKLGAKKPSVLDI------MNWVNEDIVD-------------------IG 262

  Fly   354 EALAIMRPFK--QDIW------------------PH----------LILTIIFSGPIFYGIIALP 388
            .|||....||  ..:|                  |:          |:|:|||.....:.::.: 
  Fly   263 TALASSLQFKNMDSVWYPYLLTGYCLMVPVPAKMPYNLVYSMIVDPLVLSIIFVMLCLFSVLII- 326

  Fly   389 YIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQ 453
            |.....|.|..:.::                ||..|                     :||..|.|
  Fly   327 YTQHLSWKNLTLANI----------------LLNDK---------------------SLRGLLGQ 354

  Fly   454 SCNELHNGYRAKFLTIVYWIA--ATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGY- 515
            |.....|  .:|.|.::.::.  |:.::..:|.|.|.|.|.:|..||.|.:.:.:..:.:.... 
  Fly   355 SFPFPPN--PSKHLKLIIFVLCFASVMITTMYEAYLQSYFTQPPSEPYIRSFRDIGNSSLKMAIS 417

  Fly   516 RLYVE-----KESSSLEMLENGTELFRQL--YALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDK 573
            ||.|.     ..|...|:.|:...:|..|  |.::|...  :....|..||:..     .|.|::
  Fly   418 RLEVNVLTSLNNSHFREISEDHLLIFDDLSEYLVLRDSF--NTSFIFPVSVDRW-----NGYEEQ 475

  Fly   574 AVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGILDKMTAA 638
            ..|.. |..|:.......|.|.|......||        .|......:.:|:..|.|::      
  Fly   476 QKLFA-EPAFYLATNLCFNQFMLFSPPLRRY--------LPHRHLFEDHMMRQHEFGLV------ 525

  Fly   639 EYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYD-STVISPLN--LRMLQGA-FIALGVGSLAAG 699
            .:.|....:|..|:...|:     |..||..:.: |.::..::  |::..|| ||        :.
  Fly   526 TFWKSQSFIEMVRLGLASM-----EDLSRKRNEEVSLLLDDISWILKLYLGAMFI--------SS 577

  Fly   700 VILLLEIVFIKLDQARLWMLCSRLQW 725
            ...:|||:.......|||    |.:|
  Fly   578 FCFILEILRCGERCKRLW----RCRW 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 13/121 (11%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 17/123 (14%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/148 (20%)
Ir52aNP_611041.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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