DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir48b

DIOPT Version :10

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster


Alignment Length:749 Identity:150/749 - (20%)
Similarity:246/749 - (32%) Gaps:266/749 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LQQSS-----LAILALPSL---ALSDGVCQKER-----------------NVYLDDFLQRLHRSN 82
            |||||     |.:||:.|:   .|:|.:.:..:                 |.|...:||  |...
  Fly     3 LQQSSNLLKLLLLLAISSVRTQGLNDIIIELNQRLLISNNFLYCNQSDKLNEYEIKYLQ--HMPP 65

  Fly    83 YKSVVFSQTE-LFFQHIEENLQGANECISLILDEPNQLLNSLHDRHLGHRLSLFIFYWGARWPPS 146
            ...::|:..| :.|..:|.|| ||:..:.||:.......:.||..:|..:.:.:|          
  Fly    66 ISLMIFTSIESMNFTQVEYNL-GADNKLFLIMGNEEPPYDFLHALNLHFQFAEYI---------- 119

  Fly   147 SRVIRFREPLRVVVVTRP--RKKAFRIYYNQARPCSDSQLQLVN--WYDGDNLGLQRIPLLPTAL 207
                        :|:..|  .||            |...|..||  |..|      .:.||    
  Fly   120 ------------IVIDEPVDLKK------------STKWLDFVNHLWQQG------YVQLL---- 150

  Fly   208 SVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEED--EEF----NSLDSIEKRKVRVTGGRDHRLL 266
             :|.::..:     ::|.     :.:.....||.  |::    .|.:::....|||....:....
  Fly   151 -IYTSYDEK-----LYHK-----IIFPETVIEETLVEQYISIRGSFNNLYGYPVRVAAYNNAPRS 204

  Fly   267 MLL----SKH------MNFRFKYIEA--------------PGRTQGSMRSEDGKDSNDSFTGGIG 307
            ||.    .||      |.|...:|:|              ||....::.:|......|:      
  Fly   205 MLYVNRWGKHIFAGFYMRFLRAFIDARNGSFVPVLTPSNSPGNCTLNLVNETVDVCADA------ 263

  Fly   308 LLQSGQADFFL--GDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHL 370
             |.:..|.|.|  |                |.:|.:....||| :.|:....:..||:..:|..|
  Fly   264 -LAANPAAFSLTHG----------------FRIASANVLVTHA-KPLHSYRYLTAPFQWSVWACL 310

  Fly   371 ILTIIFSGPIFYGIIALPYI-WRR--RWANSD--VEHLGELYIHMTYLKEITPRLLKLKPRTVLS 430
            ::.::..      :..|.:| |.|  :|..|.  :|....|.....|||||..|           
  Fly   311 VIYVLLV------VNFLSFIGWLRSGKWEFSKYLLEVFSSLLFSGFYLKEIRGR----------- 358

  Fly   431 AHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPA 495
                     ::.|.|.: ||:                       |.:|.:..|...|.|......
  Fly   359 ---------ERYILFGV-LFI-----------------------AGFVYSTEYLGLLKSMLISEV 390

  Fly   496 REPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVE 560
            .|..|:|.:    |::.....|.|:.....|....|..|:...:..|:              |.|
  Fly   391 FEKQIDTFE----ALVESNITLMVDPYDKILFAKYNMPEILSPIMELV--------------SFE 437

  Fly   561 AGIKLIAEGGEDKA--VLGGRETLFFNVQQYGSN--------NFQLSQKLYTRYSAVAVQIGCP- 614
            ..:|......:|.|  :...|..|:...||:..:        :|..   |||         |.| 
  Fly   438 TLLKHRNRFDQDYAYILFSDRMALYDYAQQFLKHPKLLRIPIDFSF---LYT---------GIPM 490

  Fly   615 ----FL-GSLNNVLMQLFESGILDKMTA-AEYAKQYQEVEATRI-YKGSVQAKNSEAYSRTESYD 672
                || ..|.......||||:..|:.. |::       ||.|: |...:..::.||        
  Fly   491 RKRWFLKHHLGRAWYWAFESGLTRKLALDADF-------EAVRVGYLSFLITEHVEA-------- 540

  Fly   673 STVISPLNLRMLQGAFIALGVGSLAAGVILLLEI 706
                .|||:.......|||.:|.:.|.:..::|:
  Fly   541 ----QPLNVDYFVMPAIALAIGYILALLSFVIEM 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 17/96 (18%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 18/96 (19%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 33/156 (21%)
Ir48bNP_610697.1 None

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