DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir48b

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster


Alignment Length:749 Identity:150/749 - (20%)
Similarity:246/749 - (32%) Gaps:266/749 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LQQSS-----LAILALPSL---ALSDGVCQKER-----------------NVYLDDFLQRLHRSN 82
            |||||     |.:||:.|:   .|:|.:.:..:                 |.|...:||  |...
  Fly     3 LQQSSNLLKLLLLLAISSVRTQGLNDIIIELNQRLLISNNFLYCNQSDKLNEYEIKYLQ--HMPP 65

  Fly    83 YKSVVFSQTE-LFFQHIEENLQGANECISLILDEPNQLLNSLHDRHLGHRLSLFIFYWGARWPPS 146
            ...::|:..| :.|..:|.|| ||:..:.||:.......:.||..:|..:.:.:|          
  Fly    66 ISLMIFTSIESMNFTQVEYNL-GADNKLFLIMGNEEPPYDFLHALNLHFQFAEYI---------- 119

  Fly   147 SRVIRFREPLRVVVVTRP--RKKAFRIYYNQARPCSDSQLQLVN--WYDGDNLGLQRIPLLPTAL 207
                        :|:..|  .||            |...|..||  |..|      .:.||    
  Fly   120 ------------IVIDEPVDLKK------------STKWLDFVNHLWQQG------YVQLL---- 150

  Fly   208 SVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEED--EEF----NSLDSIEKRKVRVTGGRDHRLL 266
             :|.::..:     ::|.     :.:.....||.  |::    .|.:::....|||....:....
  Fly   151 -IYTSYDEK-----LYHK-----IIFPETVIEETLVEQYISIRGSFNNLYGYPVRVAAYNNAPRS 204

  Fly   267 MLL----SKH------MNFRFKYIEA--------------PGRTQGSMRSEDGKDSNDSFTGGIG 307
            ||.    .||      |.|...:|:|              ||....::.:|......|:      
  Fly   205 MLYVNRWGKHIFAGFYMRFLRAFIDARNGSFVPVLTPSNSPGNCTLNLVNETVDVCADA------ 263

  Fly   308 LLQSGQADFFL--GDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHL 370
             |.:..|.|.|  |                |.:|.:....||| :.|:....:..||:..:|..|
  Fly   264 -LAANPAAFSLTHG----------------FRIASANVLVTHA-KPLHSYRYLTAPFQWSVWACL 310

  Fly   371 ILTIIFSGPIFYGIIALPYI-WRR--RWANSD--VEHLGELYIHMTYLKEITPRLLKLKPRTVLS 430
            ::.::..      :..|.:| |.|  :|..|.  :|....|.....|||||..|           
  Fly   311 VIYVLLV------VNFLSFIGWLRSGKWEFSKYLLEVFSSLLFSGFYLKEIRGR----------- 358

  Fly   431 AHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPA 495
                     ::.|.|.: ||:                       |.:|.:..|...|.|......
  Fly   359 ---------ERYILFGV-LFI-----------------------AGFVYSTEYLGLLKSMLISEV 390

  Fly   496 REPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVE 560
            .|..|:|.:    |::.....|.|:.....|....|..|:...:..|:              |.|
  Fly   391 FEKQIDTFE----ALVESNITLMVDPYDKILFAKYNMPEILSPIMELV--------------SFE 437

  Fly   561 AGIKLIAEGGEDKA--VLGGRETLFFNVQQYGSN--------NFQLSQKLYTRYSAVAVQIGCP- 614
            ..:|......:|.|  :...|..|:...||:..:        :|..   |||         |.| 
  Fly   438 TLLKHRNRFDQDYAYILFSDRMALYDYAQQFLKHPKLLRIPIDFSF---LYT---------GIPM 490

  Fly   615 ----FL-GSLNNVLMQLFESGILDKMTA-AEYAKQYQEVEATRI-YKGSVQAKNSEAYSRTESYD 672
                || ..|.......||||:..|:.. |::       ||.|: |...:..::.||        
  Fly   491 RKRWFLKHHLGRAWYWAFESGLTRKLALDADF-------EAVRVGYLSFLITEHVEA-------- 540

  Fly   673 STVISPLNLRMLQGAFIALGVGSLAAGVILLLEI 706
                .|||:.......|||.:|.:.|.:..::|:
  Fly   541 ----QPLNVDYFVMPAIALAIGYILALLSFVIEM 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 26/153 (17%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 18/96 (19%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 33/156 (21%)
Ir48bNP_610697.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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