DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir40a and Ir20a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster


Alignment Length:600 Identity:99/600 - (16%)
Similarity:179/600 - (29%) Gaps:216/600 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 REPLRVVVVTRPRKKAFRIYYNQARPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRT 217
            |..|.|.:..|....:..:|..:|.|..:..::.::...|..|.|.::.          :.:|..
  Fly   134 RSMLHVELYFRDYHHSLILYSFRAFPSFELVMRWISVGQGVKLFLHKLD----------DLRGHR 188

  Fly   218 FRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEA 282
            .||....|||       |..|..|...::         :|||.. ...|...:..:|...:.:..
  Fly   189 LRVIPDLSPP-------NTFFYRDARGDN---------QVTGYL-WDFLATFAGRLNAGLEVVRP 236

  Fly   283 PGRTQGSMRSEDGKDSNDSFT---GGIGLLQSGQADFFLGDVGLS------WERRKAIEFSFFTL 338
            ..|.        |..|:.|:.   ...||:          ||||:      |......::::..|
  Fly   237 SWRA--------GSASDSSYMLEYSAKGLI----------DVGLTTTLITKWNLWAIHQYTYPLL 283

  Fly   339 ADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHL 403
            ..|  :.|..|  :.:.||....|.:.:.|.|.:|::.       ||.:.::..|:..       
  Fly   284 VSS--WCTMLP--VEKPLATPDLFGRIVCPTLAMTLLL-------IILVTWLVFRQLR------- 330

  Fly   404 GELYIHMTYLK-----EITPRLLKLKPRTVLSAHQMPHQLF-----------------QKCIWFT 446
                 .:|.||     .|.|.||.|...|..||..:...:|                 ||.:...
  Fly   331 -----CLTRLKNSRPARIVPHLLTLLLLTTCSAQLLSLLIFPPYHVRIASFEDLLRGDQKILGMR 390

  Fly   447 LRLFLKQSCNELHN---GYRAKFLTIVYWIAATYVLADVYS-AQLTSQFARPAREPPINTLQRLQ 507
                     ||.:|   .:||::..:.|.|.....|.|:.: ...|..:..|             
  Fly   391 ---------NEFYNFDGAFRARYAGVFYLIDDPNELYDLRNHFNTTWAYTMP------------- 433

  Fly   508 AAMIHDGYRLYVEKESSSLEMLENGTELFRQ-----LYALMRQQVINDPQGFFIDSVEAGIKLIA 567
                      |::......:.......|||.     .:..|...||..|...:.:|:        
  Fly   434 ----------YIKWLVIKTQQRHFSKPLFRWSKDLCFFDFMPTSVIVAPDSIYWESI-------- 480

  Fly   568 EGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGIL 632
                        :...|.:.|.|.....:.:..|                       .:.::|  
  Fly   481 ------------KDFTFRIHQAGLMKHWIRKSFY-----------------------DMIKAG-- 508

  Fly   633 DKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLA 697
             ||:..:|:                              |...:.|||:..|:..:...|.....
  Fly   509 -KMSIKDYS------------------------------DLETLKPLNIGDLEIVWRVCGAAIAV 542

  Fly   698 AGVILLLEIVFIKLD 712
            |..|.::|:::..::
  Fly   543 ASAIFIMELLYFYIN 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 24/130 (18%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 21/102 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 16/145 (11%)
Ir20aNP_608456.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.