DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir11a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster


Alignment Length:529 Identity:109/529 - (20%)
Similarity:174/529 - (32%) Gaps:149/529 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 FRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFK---- 278
            |.|...|.||  .:.|..:   :|....|..||....:   .|.|..||.||:|.:.||.:    
  Fly   241 FNVGAAHMPP--HLIYKRH---KDPPPASNVSIPAEDL---AGIDWDLLQLLAKALKFRIQLYMP 297

  Fly   279 ----YIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLA 339
                .|...|...|..|.                |..|.....:|  |||...::...||..|:.
  Fly   298 QEPSQIFGEGNVSGCFRQ----------------LADGTVSIAIG--GLSGSDKRRSLFSKSTVY 344

  Fly   340 DSGAF--ATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEH 402
            ....|  .....|.|.....::.||:..:|..:|:.::        :..|...|.|       ..
  Fly   345 HQSNFVMVVRRDRYLGRLGPLILPFRGKLWGVIIVILL--------LAVLSTCWLR-------SR 394

  Fly   403 LGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFL 467
            ||        |......||.:.....:..|::|.:.|       ||..|..              
  Fly   395 LG--------LSHPIEDLLTVIVGNPIPDHRLPGKGF-------LRYLLAS-------------- 430

  Fly   468 TIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLENG 532
                |:..|.||...|.|:| ....|.:|..|   |.:..:.:|.|.|           .|:.||
  Fly   431 ----WMLLTLVLRCAYQARL-FDVLRLSRHRP---LPKDLSGLIKDNY-----------TMVANG 476

  Fly   533 TELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLS 597
            ...|..|....||     |..|     .|..:.:.....|:.:.  ...|..|:..:...:..:|
  Fly   477 YHDFYPLELTCRQ-----PLDF-----SARFERVQRAAPDERLT--TIALISNLAYWNHKHPNIS 529

  Fly   598 QKLYTR-----YSAVAVQIGCP---FL-GSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIY 653
            :..:.|     |..|   |..|   || .:::..:.||..:|::     |...::|.:.|..|  
  Fly   530 RLTFVRQPIYMYHLV---IYFPRRFFLRPAIDRKIKQLLSAGVM-----AHIERRYMQYENKR-- 584

  Fly   654 KGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALG-VGSLAAGVILLLEIVFIKLDQARLW 717
                         :..|.|..::..:...::.||:...| |..||.|:.:|..:......:.|.|
  Fly   585 -------------KVASNDPVLLRRITKSIMNGAYRIHGLVIVLATGMFILELLAGRSNGRLRRW 636

  Fly   718 MLCSRLQWI 726
            |     :|:
  Fly   637 M-----EWV 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 31/127 (24%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 17/95 (18%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/149 (20%)
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 13/67 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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