DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir10a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster


Alignment Length:744 Identity:152/744 - (20%)
Similarity:271/744 - (36%) Gaps:202/744 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LPYLLGL--LNSTRLTFIGNDESDTAIALTQIVRGLQQSSLAILALPSLALSDGVCQKERNVYLD 72
            |.::|.|  ||.|||..:          |.:..|.|.|     |.|...|.||.  |...|.|:.
  Fly     9 LLFMLDLKTLNLTRLNGL----------LVEPTRDLPQ-----LELWLRAGSDH--QDAENPYVQ 56

  Fly    73 DFLQRLHRSNYKSVVFSQTELFFQHIEENLQGANECISLILDEPNQLLNSLHDRHLGHRLSLFIF 137
            .||.|....  .|:|..|...::  :::.....|..:.:.||   |||.:........:.|.| |
  Fly    57 WFLLRTEIP--LSIVTYQENRYW--MDDPFGRRNLVLVMSLD---QLLTNRGAAAPIQKASTF-F 113

  Fly   138 YWGARWPPSSRVIRFREPLRVVVVTRPRKKAFRIY------------YNQARPCSDSQLQLVNWY 190
            |..|   ...:.:...|.||:....|......::|            |:..:....:..:||.:|
  Fly   114 YILA---DQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRRDSAFGRLVRYY 175

  Fly   191 DGDNLGLQRIPLLPTALSVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKV 255
            ..:.|.    .||      :.:..|...|:.:|.|      .|....|  |:|...|       .
  Fly   176 GSETLD----KLL------FRDMAGYPLRIQMFRS------VYTRPEF--DKETGLL-------T 215

  Fly   256 RVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQAD----- 315
            ||| |.|..:..:|.:.:||.. .::.|.:.....||     :|.|:.|.||.:.....|     
  Fly   216 RVT-GVDFLVAQMLRERLNFTM-LLQQPEKKYFGERS-----ANGSYNGAIGSIIKDGLDICLTG 273

  Fly   316 FFLGDVGLSWERRKAIEFSFFTLA-DSGAFATHAPR--RLNEALAIMRPFKQDIWPHLILTIIFS 377
            ||:.|..:.       ::..||:| .......:.|:  |:.:::..:.....|||...:||    
  Fly   274 FFVKDYLVQ-------QYMDFTVAVYDDELCIYVPKASRIPQSILPIFAVGYDIWLGFVLT---- 327

  Fly   378 GPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQK- 441
                  ..|...||                        :|.|::.||.|.|...:|  |.:.|. 
  Fly   328 ------AFACALIW------------------------LTLRVINLKLRIVSLGNQ--HIVGQAL 360

  Fly   442 -------CIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPP 499
                   .:|..|.|      :.|...| |:.:.|......:.:...::.:.|.:.:..|.....
  Fly   361 GIMVDTWVVWVRLNL------SHLPASY-AERMFIGTLCLVSVIFGAIFESSLATVYIHPLYYKD 418

  Fly   500 INTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVI--NDPQGFFIDSV--- 559
            |||:|.|.    ..|.::..:..|.:.::..:.|.   .|:|.:.:::.  .|.:...||.|   
  Fly   419 INTMQELD----ESGLKVVYKYSSMADDLFFSETS---PLFASLNKKLSWNRDLRADVIDEVARF 476

  Fly   560 --EAGI----KLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYT-----RYSAVAVQI-- 611
              :||:    .||.|                      |::|.|.:|::.     :|..::..:  
  Fly   477 RNKAGVSRYTSLILE----------------------SSHFTLLRKIWVVPECPKYYTISYVMPR 519

  Fly   612 GCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVI 676
            ..|:..::|.:|::...:|::.|....|  |.:.:::    .:.::...::|         |.::
  Fly   520 DSPWEDAVNALLLRFLNAGLIVKWIQDE--KSWVDIK----MRSNILEADAE---------SELV 569

  Fly   677 SPLNLRMLQGAFIALGVGSLAAGVILLLE 705
            ..|.:..||.||..:..|:|.|.:..|.|
  Fly   570 RVLTIGDLQLAFYVVIGGNLLAFLGFLAE 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 29/126 (23%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/101 (20%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 29/158 (18%)
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 19/86 (22%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 25/138 (18%)
Lig_chan 319..587 CDD:278489 64/354 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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