DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and GRID2

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:XP_011530195.2 Gene:GRID2 / 2895 HGNCID:4576 Length:1035 Species:Homo sapiens


Alignment Length:931 Identity:158/931 - (16%)
Similarity:286/931 - (30%) Gaps:344/931 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LNSTRLTFIGNDESDTAIALTQIVRGLQQSSLAILALPS----------LALSD----------- 60
            |..||.|   |..:..|.||.|  :..:..:..||||.|          .:|:|           
Human    74 LRETRGT---NTTASPATALPQ--KTCELMNQGILALVSSIGCTSAGSLQSLADAMHIPHLFIQR 133

  Fly    61 ----------GVCQKERN----------VYLDDFLQRLHRSNY---KSVVFSQTELFFQHIEENL 102
                      |:.:..||          |||.|.:.|: .:.|   |.::|..:|...:.|:|.|
Human   134 STAGTPRSGCGLTRSNRNDDYTLSVRPPVYLHDVILRV-VTEYAWQKFIIFYDSEYDIRGIQEFL 197

  Fly   103 -----QGANECISLILDEPNQLLNSLHDRHLGHRLSLFIFYWGARWPPSSRVIRFREPLR--VVV 160
                 ||.:..:..:.:..|:::.:|.|......|:                 |:|:.||  ::|
Human   198 DKVSQQGMDVALQKVENNINKMITTLFDTMRIEELN-----------------RYRDTLRRAILV 245

  Fly   161 VTRPRKKAF---------------RIYYNQARPCSDSQLQLVNWYDGDNL---GLQRIPLLPTAL 207
            :.....|:|               .|..|:.          :|..|...|   .:.|:.::....
Human   246 MNPATAKSFITEVVETNLVAFDCHWIIINEE----------INDVDVQELVRRSIGRLTIIRQTF 300

  Fly   208 SVYANFKGRTFR----------------------------------VPVFH-------------- 224
            .|..|...|.||                                  ...||              
Human   301 PVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASL 365

  Fly   225 ------SPPW------------------------------------------------------- 228
                  |.||                                                       
Human   366 SCIRKNSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKNER 430

  Fly   229 ---------FW--------VTYCNNSFEEDEEFNSLDSIEKRKVRVTG-----------GRDHR- 264
                     .|        ||..|.|..:.:..|::..:..|.|.|..           |:..: 
Human   431 IRPQGSTGKIWPQLGCWNPVTGLNGSLTDKKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKY 495

  Fly   265 ------LLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGL 323
                  :|..||.::.|.::...||....||.: |||     ::.|.:|.|...:||..:..:.:
Human   496 QGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ-EDG-----TWNGLVGELVFKRADIGISALTI 554

  Fly   324 SWERRKAIEFSFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALP 388
            :.:|...::|:...:..|.........:..:..|.:.||...:|..:..|::..|.:.|.:    
Human   555 TPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLL---- 615

  Fly   389 YIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQ 453
                 .|.|                          .||  |....|........:||....|::|
Human   616 -----NWLN--------------------------PPR--LQMGSMTSTTLYNSMWFVYGSFVQQ 647

  Fly   454 SCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQA------AMIH 512
            .....:.....:.:...:|:.|..|::. |:|.|.:.......|..|.:||.|..      ..:.
Human   648 GGEVPYTTLATRMMMGAWWLFALIVISS-YTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVL 711

  Fly   513 DGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGE----DK 573
            |. .:|.......|...|..: ::.|::.::.:.  |..:...::| :|||:.:..|..    |.
Human   712 DS-AVYEHVRMKGLNPFERDS-MYSQMWRMINRS--NGSENNVLES-QAGIQKVKYGNYAFVWDA 771

  Fly   574 AVLGGRETLFFNVQQYGSNN------FQLSQKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGIL 632
            |||           :|.:.|      :.:...:..|...:|:|.|.|:....:..:::|.::|.:
Human   772 AVL-----------EYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDM 825

  Fly   633 DKMTAAEYAKQYQEVEATRIYKGSVQAKNSEA--YSRTESYDSTVISPLNLRMLQGAFIALGVGS 695
            |                  |.|.....||.:.  ||..::....  ..|:::...|.|..|..|.
Human   826 D------------------ILKHKWWPKNGQCDLYSSVDTKQKG--GALDIKSFAGVFCILAAGI 870

  Fly   696 LAAGVILLLEIVFIKLDQARL 716
            :.:..|.:||..:.|...:|:
Human   871 VLSCFIAMLETWWNKRKGSRV 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 36/265 (14%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 15/93 (16%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/156 (19%)
GRID2XP_011530195.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156071
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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