Sequence 1: | NP_610140.4 | Gene: | Ir40a / 35449 | FlyBaseID: | FBgn0259683 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001244950.1 | Gene: | GRIA1 / 2890 | HGNCID: | 4571 | Length: | 916 | Species: | Homo sapiens |
Alignment Length: | 540 | Identity: | 101/540 - (18%) |
---|---|---|---|
Similarity: | 199/540 - (36%) | Gaps: | 111/540 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 189 WYDGDNLGLQRIPLLPTALSVYA-----NFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLD 248
Fly 249 SIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQ 313
Fly 314 ADFFLGDVGLSWERRKAIEFS--FFTLADSGAFATHAPRRLNEAL-AIMRPFKQDIWPHLILTII 375
Fly 376 FSGPIFYGIIALPYIWRR----RWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPH 436
Fly 437 QLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPPIN 501
Fly 502 TLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLI 566
Fly 567 AEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGI 631
Fly 632 LDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTE-------SYDSTVISPLNLRMLQGAFI 689
Fly 690 ALGVGSLA-AGVILLLEIVF 708 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir40a | NP_610140.4 | PBP2_LTTR_substrate | 216..338 | CDD:330233 | 26/123 (21%) |
Periplasmic_Binding_Protein_Type_2 | 297..>391 | CDD:328725 | 20/96 (21%) | ||
Periplasmic_Binding_Protein_Type_2 | <496..637 | CDD:328725 | 26/140 (19%) | ||
GRIA1 | NP_001244950.1 | PBP1_iGluR_AMPA_GluR1 | 36..399 | CDD:107385 | 2/13 (15%) |
ANF_receptor | 47..382 | CDD:279440 | |||
PBP2_iGluR_AMPA_GluR1 | 416..797 | CDD:270447 | 81/461 (18%) | ||
Lig_chan | 548..827 | CDD:278489 | 62/341 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165156052 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |