DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and Ir41a

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster


Alignment Length:694 Identity:133/694 - (19%)
Similarity:250/694 - (36%) Gaps:164/694 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LSDGVCQKE---RNVYLDDFLQRLHRSNYKSVVFSQTE---LFFQHIEENLQGANECISLILDEP 116
            :..|:.:||   ::::||:.:.::    ..|:..:..|   :|.:.|:..:...|:.      ..
  Fly    62 IDTGLKKKELQNKHLFLDELVIKI----IISIEVTHCETFVVFDKDIDRFVNAFNKA------SV 116

  Fly   117 NQLLNSLHDRHLGHRLSLFIFYWGARWPPSSRVIRFREPLRVVVVTRPRKKA--FRIYYNQ---A 176
            ..:..|||::        |:|...|...|.||...|.:...::.|.|....|  |.|..|:   .
  Fly   117 YSIWRSLHNK--------FVFAHIANESPESRNHFFEDQPNILFVVRDHSSASSFDIKTNKFVGR 173

  Fly   177 RPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYA----NFKGRTFRVPVFHSPPWFWVTYCNNS 237
            :..:.||:.||:.|....   ||...   ..|::|    |.:||...:..|..||:..:.:..::
  Fly   174 KAENPSQMILVDRYLASE---QRFQF---GKSLFADKLNNLQGREVIIAGFDYPPYTVIKHNMST 232

  Fly   238 FEED------EEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGK 296
            ..:|      .:|.::         ...|.:.|:::...:..|...:...:.....|.:.     
  Fly   233 NAQDMGVSGESDFKNV---------YIDGTETRIVLNFCEQFNCTIQIDSSAANDWGKVY----- 283

  Fly   297 DSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNEALAIMRP 361
             .|.|..|.:|:|.:.:||..:|.:...:|....::.|.:.:.........||.||......:.|
  Fly   284 -PNMSGDGALGMLINRKADICIGAMYSWYEDYTYLDLSMYLVRSGITCLVPAPLRLTSWYLPLEP 347

  Fly   362 FKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPR 426
            ||:.:|..::|.:                                      ..|.|..:|..|..
  Fly   348 FKETLWAAILLCL--------------------------------------CAEATGLVLAYKSE 374

  Fly   427 TVLSAHQMPHQLFQKCIWF----TLRLFLKQSCNELHNGYRAKFLTIVYWIAATY----VLADVY 483
            ..|.......:.:..|..|    |.:||:.||.|.     :|..||:...:.|.:    ::..:|
  Fly   375 QALYVLPGYREGWWTCTSFGVCTTFKLFISQSGNS-----KAYSLTVRVLLFACFLNDLIITSIY 434

  Fly   484 SAQLTSQFARPAREPPINTLQRLQAAMIHDGYRL-YVEKESSSLEMLENGTELFRQLYALMRQQV 547
            ...|.|....|:.:...:|:.||:.      :|| :.....:.:..:....|      ||::..:
  Fly   435 GGGLASILTIPSMDEAADTVTRLRF------HRLQWAANSEAWVSAIRASDE------ALVKDIL 487

  Fly   548 INDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKL------------ 600
            .|    |.|.|.:..::|    .:|:.:..|     |.|::....:|.:...|            
  Fly   488 YN----FHIYSDDELLRL----AQDQHMRIG-----FTVERLPFGHFAIGNYLGPQAIDQLVIMK 539

  Fly   601 ---YTRYSAVAVQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNS 662
               |.:|:...|....|.|..||.::.....|| .||..      :|:.|......|  :|.:..
  Fly   540 DDIYFQYTVAFVPRLWPLLDKLNTLIYSWHSSG-FDKYW------EYRVVADNLNLK--IQQQVQ 595

  Fly   663 EAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEI 706
            |..:.|:.....   ||.:....|..|...:||..|.:..|||:
  Fly   596 ETMTGTKDIGPV---PLGMSNFAGFIIVWILGSAIATLTFLLEL 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 20/127 (16%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 19/93 (20%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/156 (19%)
Ir41aNP_995744.4 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462995
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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