Sequence 1: | NP_610140.4 | Gene: | Ir40a / 35449 | FlyBaseID: | FBgn0259683 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006513350.1 | Gene: | Grin3b / 170483 | MGIID: | 2150393 | Length: | 1138 | Species: | Mus musculus |
Alignment Length: | 546 | Identity: | 109/546 - (19%) |
---|---|---|---|
Similarity: | 201/546 - (36%) | Gaps: | 163/546 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 235 NNSFEEDEEFNSLD--SIEKRKVRVTGGRDHRLLMLLSKHMNFRFK-YIEAPGRTQGSMRSEDGK 296
Fly 297 DSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNEALAIM-- 359
Fly 360 -----RPFKQDIWP-HLILTI-IFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEIT 417
Fly 418 PRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADV 482
Fly 483 YSAQLTSQFARPAREPPINTLQRLQAAMIHD--------GYRLYVEKESSSLEMLENGTELFRQL 539
Fly 540 YALMRQ-----------QVINDP---QGFFID--------SVEAGIKLIAEGGEDKAVLGGRETL 582
Fly 583 FFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEV 647
Fly 648 EATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEIVFIKL- 711
Fly 712 -------DQARLWMLCSRLQWIRYDR 730 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir40a | NP_610140.4 | PBP2_LTTR_substrate | 216..338 | CDD:330233 | 28/105 (27%) |
Periplasmic_Binding_Protein_Type_2 | 297..>391 | CDD:328725 | 20/102 (20%) | ||
Periplasmic_Binding_Protein_Type_2 | <496..637 | CDD:328725 | 31/170 (18%) | ||
Grin3b | XP_006513350.1 | PBP1_iGluR_NMDA_NR3 | 141..481 | CDD:380600 | |
PBP2_iGluR_NMDA_Nr3 | 494..888 | CDD:270438 | 90/450 (20%) | ||
Lig_chan | 656..922 | CDD:365843 | 60/354 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846580 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |