DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir40a and LOC110438919

DIOPT Version :9

Sequence 1:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:676 Identity:122/676 - (18%)
Similarity:220/676 - (32%) Gaps:224/676 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SVVFSQTELFFQHIEENLQGANECISLILDEPNQLLNSLHDRHLGHRLSLFIFYWG--ARWPPSS 147
            :|.|....|.|.  |:..|...:.:.::||:..|                    |.  .:|...|
Zfish   203 NVTFEGRNLSFS--EDGYQMHPKLVIILLDKERQ--------------------WDRVGKWENGS 245

  Fly   148 RVIRFREPLRVVVVTRPRKKAFRIYYN-QARPCSDSQLQLVNWYDGDNLGLQRI-PLLPTALSVY 210
            ..:::.        ..||   |.:|.. :||  .|..|.:|...:...:.::.: ||..|.:   
Zfish   246 LSMKYH--------VWPR---FELYSGPEAR--EDDHLSIVTLEEAPFVIVEDVDPLSGTCM--- 294

  Fly   211 ANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKV---RVTGGRDHRLLMLLSKH 272
                                    .|:....::..:|:..:...|   |...|....:|..::|:
Zfish   295 ------------------------RNTVPCRKQLKALNQTQDSAVYIKRCCKGFCIDILKKIAKN 335

  Fly   273 MNFRFK-YIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSF- 335
            :.|.:. |:...|:        .||..|.::.|.:|.:....|...:|.:.::.||.:.|:||. 
Zfish   336 VKFTYDLYLVTNGK--------HGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVP 392

  Fly   336 -----FTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRW 395
                 .::..|.:..|.:|.      |.:.||..|:|..:.:.::....|...|.          
Zfish   393 FIETGISVMVSRSNGTVSPS------AFLEPFSADVWIMMFVMLLLVSAIAVFIF---------- 441

  Fly   396 ANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQM--PHQLFQKCIWFTLRLFLKQSCNEL 458
                     |.:..:.|            .|.:....:.  |.....|.||....|....|. .:
Zfish   442 ---------EYFSPVGY------------NRCLADGREAGGPSFTIGKAIWLLWGLVFNNSV-PV 484

  Fly   459 HN--GYRAKFLTIVYWIAATYVLADVYSAQLTS-----------------QFARPAR-EPPI--- 500
            .|  |..:|.:..|:...|...||. |:|.|.:                 :|..|.. .||.   
Zfish   485 QNPRGTTSKIMVSVWAFFAVIFLAS-YTANLAAFMIQEEYVDQVSGLSDKKFQNPNDFSPPFRFG 548

  Fly   501 ------------NTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQG 553
                        |..:.:.:.|:....|..||    :||.|:.| :|...:|   ...|:|    
Zfish   549 TVPNGSTERNIRNNYRDMHSYMVKFHQRNVVE----ALESLKTG-KLDAFIY---DAAVLN---- 601

  Fly   554 FFIDSVEAGIKLIAEG-GEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLG 617
             ::...:.|.||:..| |:..|..|           ||                :|:|....:..
Zfish   602 -YMAGRDEGCKLVTIGSGKVFASTG-----------YG----------------IAIQKDSGWKR 638

  Fly   618 SLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLR 682
            .::..::|||..|            :.:|:||..: .|....:.:|..|          |.|::.
Zfish   639 QVDLAILQLFGDG------------EMEELEALWL-TGICHHEKNEVMS----------SQLDVD 680

  Fly   683 MLQGAFIALGVGSLAAGVILLLEIVF 708
            .:.|.|..||.....:.:..:.|.||
Zfish   681 NMAGVFYMLGAAMALSLITFIAEHVF 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 22/131 (17%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/99 (20%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/157 (19%)
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 12/81 (15%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 93/526 (18%)
DUF4013 <389..478 CDD:315788 20/125 (16%)
NMDAR2_C 704..1417 CDD:313729 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591410
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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