DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3635 and Lipo1

DIOPT Version :10

Sequence 1:NP_610138.4 Gene:CG3635 / 35447 FlyBaseID:FBgn0032981 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001309994.1 Gene:Lipo1 / 329055 MGIID:3647308 Length:399 Species:Mus musculus


Alignment Length:407 Identity:144/407 - (35%)
Similarity:218/407 - (53%) Gaps:28/407 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MLLTLVLLLLSRKIGLVDG------HKVTATSISNH-NYPVEEHTVITHDDYILTIYRIPSSPNR 86
            :|.|:.|:.:..||..:.|      ..:..:.|..| .||.||:.|:|.|.|||.|.|||...|.
Mouse     4 LLRTMCLIHVLGKIFCLIGPNKNPESNMNVSQIIKHWEYPSEEYEVVTDDGYILPINRIPHGKNN 68

  Fly    87 SHLNRAGRRAVVFLQHGILSASDDWIINGPEASLAYMLADAGYDVWLGNARGNTYSRQHKHIHPD 151
            :  |.:..:.|||...|:.|.:..|:.|.|:.|||::||||||||||||.||:|::::|..::||
Mouse    69 A--NSSAPKMVVFCLPGLFSTAGVWVSNPPDNSLAFILADAGYDVWLGNNRGSTWAKKHVTLNPD 131

  Fly   152 TSDFWRFSWHEIGVYDLAAMLDYALAKSQSSSLHFVAHSQGTTAFFVLMSSLPLYNEKLRSVHLL 216
            :.:||.||:.|:..|||.|::::.|.|:....:::..|||||.......::.....||::...|:
Mouse   132 SKEFWAFSYDEMIKYDLPAIINFILEKTGQKQIYYAGHSQGTLIALGAFATNQELAEKIKLSILI 196

  Fly   217 API---AYMRDHSFILSKLGGIFLGTPSFLSWVLGSMELLPITNLQKLICEHICSSSSMFNFLCS 278
            |||   .|::..    .:|...|  ||:....|.|..|..| |.:...:.:|:| ...:.:..|:
Mouse   197 APIHTVKYVKGS----GRLPAYF--TPTAFKIVFGEKEFFP-TKVFSRLSQHVC-DIKLVDAGCA 253

  Fly   279 GLLDFIGGWGTRHLNQTLLPDVCATHPAGASSSQV-IHYLQLYRSGDFRQYDHG-PELNEIIYQQ 341
            .:|..:.|:....|| |...||..||....||.|: |||.|..|||.|:.||.| |.||...|.|
Mouse   254 TVLGSLTGYSPEQLN-TSRVDVYITHSLAESSVQILIHYGQAIRSGVFQAYDWGSPSLNMQHYNQ 317

  Fly   342 PTPPSYNVQYIKSCVDMYYSENDYMSAVGDVKYLASLLPCAQ--LYRIPFRDWNHYDFLWSNNVK 404
            .|||.|||:.:|....|:....|::|...||   |:|:|...  .|.....|::|.||:...|.:
Mouse   318 TTPPVYNVEDMKVPTAMFSGLKDFLSNPEDV---ANLVPKISNLTYHKIISDFSHLDFITGLNAR 379

  Fly   405 EVINNKIIQKIRKYDED 421
            |.::.:|:..:||||.|
Mouse   380 EEVSEEILTILRKYDGD 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3635NP_610138.4 PLN02872 55..416 CDD:215470 133/368 (36%)
Lipo1NP_001309994.1 PLN02872 34..391 CDD:215470 133/370 (36%)

Return to query results.
Submit another query.