DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3635 and Lipm

DIOPT Version :10

Sequence 1:NP_610138.4 Gene:CG3635 / 35447 FlyBaseID:FBgn0032981 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001419222.1 Gene:Lipm / 309528 RGDID:1304912 Length:422 Species:Rattus norvegicus


Alignment Length:406 Identity:138/406 - (33%)
Similarity:216/406 - (53%) Gaps:23/406 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RGSVMLLTLVLLLLSRKIGLVDGHKVTATS-----------ISNHNYPVEEHTVITHDDYILTIY 78
            |..:.||.||..||.|.:.  .||..|..:           |.:..||.||:.|.|.|.|||::.
  Rat    14 RVEIWLLILVAYLLQRNVN--SGHMPTKAADPEAFMNVSEIIKHKGYPSEEYEVATEDGYILSVN 76

  Fly    79 RIPSSPNRSHLNRAGRRAVVFLQHGILSASDDWIINGPEASLAYMLADAGYDVWLGNARGNTYSR 143
            |||.  .::.|.:.|.|.||.||||:|..:.:||.|.|..||.::|||||:|||:||:||||:||
  Rat    77 RIPR--GQTQLKKEGSRPVVLLQHGLLGDASNWISNLPNNSLGFILADAGFDVWMGNSRGNTWSR 139

  Fly   144 QHKHIHPDTSDFWRFSWHEIGVYDLAAMLDYALAKSQSSSLHFVAHSQGTTAFFVLMSSLPLYNE 208
            :||.:..|..:||.||:.|:..:||.|::::.|.|:....:::|.:|||||..|:..|::|....
  Rat   140 KHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQKKIYYVGYSQGTTMGFIAFSTMPELAH 204

  Fly   209 KLRSVHLLAPIAYMRDHSFILSKLGGIFLGTPS-FLSWVLGSMELLPITNLQKLICEHICSSSSM 272
            |::....|||||.:: |:   ...|..||..|. .:..:.|..|.|..|...:.:..::| ...:
  Rat   205 KIKMYFALAPIATVK-HA---KSPGTKFLLLPDMMIKGLFGRQEFLYQTRFFRQLFIYLC-GQMI 264

  Fly   273 FNFLCSGLLDFIGGWGTRHLNQTLLPDVCATHPAGASSSQVIHYLQLYRSGDFRQYDHGPEL-NE 336
            .:.:||.::..:||:.|.::|.:......|..|||.|...::|:.|...||:.|.:|.|.|. |.
  Rat   265 LDQICSNIILLLGGFNTNNMNMSRANVYVAHTPAGTSVQNILHWSQAVNSGELRAFDWGSETKNR 329

  Fly   337 IIYQQPTPPSYNVQYIKSCVDMYYSENDYMSAVGDVKYLASLLPCAQLYRIPFRDWNHYDFLWSN 401
            ....||||..|.|:.:.....|:....|::|...|||.|.|.: ...:|.....:|.|.||:|..
  Rat   330 EKSNQPTPIRYKVRDMMVPTAMWTGGQDWLSNPDDVKTLLSEV-TNLIYHKNIPEWAHVDFIWGL 393

  Fly   402 NVKEVINNKIIQKIRK 417
            :....:.|:||..:::
  Rat   394 DAPHRVYNEIIHLMKQ 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3635NP_610138.4 PLN02872 55..416 CDD:215470 127/362 (35%)
LipmNP_001419222.1 PLN02872 50..408 CDD:215470 127/365 (35%)

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