DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and ZNF225

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001308614.1 Gene:ZNF225 / 7768 HGNCID:13018 Length:706 Species:Homo sapiens


Alignment Length:464 Identity:133/464 - (28%)
Similarity:200/464 - (43%) Gaps:104/464 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 FKCDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQ 191
            ||||:|...|...|.||.|..:|     .:::.......|.|..:.||   :.:..::..|:   
Human   288 FKCDICCKSFRSRANLNRHSMVH-----MREKPFRCDTCGKSFGLKSA---LNSHRMVHTGE--- 341

  Fly   192 IQIVSSDTLEPVQQSVMQQQQHESKASKCINCGSSML-------QQSKRKGPKQVRCESCMQAEQ 249
                                    |..||..||...:       .|....|.|...|:.|.::.:
Human   342 ------------------------KRYKCEECGKRFIYRQDLYKHQIDHTGEKPYNCKECGKSFR 382

  Fly   250 TAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKRNSQ 314
            .|                            :.|.:.|...:|.||.|.| ..|.|.:...:|.|.
Human   383 WA----------------------------SGLSRHVRVHSGETTFKCE-ECGKGFYTNSQRYSH 418

  Fly   315 QMT-------KCQKCNGSGV---VLVGQHSHASHSGVGGSVKQSVTVKTEC------LSC----- 358
            |..       :|::| |.|.   :.:..|... |.|     ::....| ||      .||     
Human   419 QRAHSGEKPYRCEEC-GKGYKRRLDLDFHQRV-HRG-----EKPYNCK-ECGKSFGWASCLLNHQ 475

  Fly   359 --RNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPY 421
              .:..|||.|..||..|::.|.|::|:::|||||.:||..||..|.:...|.:|.|:|||.|||
Human   476 RIHSGEKPFKCEECGKRFTQNSQLYTHRRVHSGEKPFKCEECGKRFTQNSQLYSHRRVHTGVKPY 540

  Fly   422 KCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAF 486
            ||:.||..|:...:|..|:|.|:|||||.|..|.|.|:|.:::.||:|:|..|||:|||.||..|
Human   541 KCEECGKGFNSKFNLDMHQRVHTGERPYNCKECGKSFSRASSILNHKRLHGDEKPFKCEECGKRF 605

  Fly   487 SQAAHLKNHAKVHSGEKPYKCEICSAAFADRFALKRHRGIHQKYGQTAPRQTSSDGMIVHKQEIP 551
            ::.:.|.:|.:||:||||||||.|..:|........|:.:|.:  :...:.......|||...:.
Human   606 TENSQLHSHQRVHTGEKPYKCEKCGKSFRWASTHLTHQRLHSR--EKLLQCEDCGKSIVHSSCLK 668

  Fly   552 DMEDEAQQE 560
            |.:.:...|
Human   669 DQQRDQSGE 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 63/138 (46%)
C2H2 Zn finger 367..387 CDD:275368 7/19 (37%)
zf-H2C2_2 379..403 CDD:290200 11/23 (48%)
C2H2 Zn finger 395..415 CDD:275368 7/19 (37%)
zf-H2C2_2 407..432 CDD:290200 14/24 (58%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 435..460 CDD:290200 13/24 (54%)
C2H2 Zn finger 451..471 CDD:275368 8/19 (42%)
zf-H2C2_2 464..488 CDD:290200 13/23 (57%)
COG5048 475..>529 CDD:227381 24/53 (45%)
C2H2 Zn finger 479..499 CDD:275368 7/19 (37%)
zf-H2C2_2 491..515 CDD:290200 13/23 (57%)
C2H2 Zn finger 507..527 CDD:275368 5/19 (26%)
ZNF225NP_001308614.1 KRAB 8..48 CDD:307490
C2H2 Zn finger 153..170 CDD:275368
C2H2 Zn finger 178..198 CDD:275368
COG5048 202..634 CDD:227381 125/417 (30%)
C2H2 Zn finger 206..226 CDD:275368
C2H2 Zn finger 234..254 CDD:275368
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 290..310 CDD:275368 8/19 (42%)
C2H2 Zn finger 318..338 CDD:275368 4/22 (18%)
C2H2 Zn finger 346..366 CDD:275368 4/19 (21%)
C2H2 Zn finger 374..394 CDD:275368 5/47 (11%)
C2H2 Zn finger 402..422 CDD:275368 6/20 (30%)
C2H2 Zn finger 430..450 CDD:275368 5/21 (24%)
C2H2 Zn finger 458..478 CDD:275368 5/20 (25%)
C2H2 Zn finger 486..506 CDD:275368 7/19 (37%)
C2H2 Zn finger 514..534 CDD:275368 7/19 (37%)
C2H2 Zn finger 542..562 CDD:275368 7/19 (37%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..618 CDD:275368 7/19 (37%)
C2H2 Zn finger 626..646 CDD:275368 5/19 (26%)
C2H2 Zn finger 654..672 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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