DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and znf1015

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001025341.1 Gene:znf1015 / 562615 ZFINID:ZDB-GENE-050913-139 Length:436 Species:Danio rerio


Alignment Length:473 Identity:119/473 - (25%)
Similarity:164/473 - (34%) Gaps:160/473 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 DAQGRIQ--IVNQNKPIAANTI-----SNISFKCDVCSDMFPHLALLNAHKRMHTDGE-----QQ 155
            |..|:.|  :.::...:|.||.     ...||.|..|...|.....|..|..:|| ||     .|
Zfish    47 DQCGKHQDSMTDEPSSVAKNTSCERAEKTKSFPCHQCGKHFSRKQSLKVHMGIHT-GENLSTCDQ 110

  Fly   156 QQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQIQIVSSDTLEPVQQSVMQQQQHE-SKASK 219
            ..:..|.::|.|.                                        ..:.|. .|...
Zfish   111 CGKSFNTKSGFDK----------------------------------------HMKTHSGEKPFW 135

  Fly   220 CINCGSSM-------LQQSKRKGPKQVRCESCMQAEQTAQQQQQLFVAQDGQMAHPVQIISTTPQ 277
            |..||.|.       :..:...|.|...||.|   |:..:|...|                    
Zfish   136 CTECGRSFCKKYTLEMHMAVHTGEKPFACEHC---EKKFRQMGNL-------------------- 177

  Fly   278 AQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKRNSQQMTKCQKCNGSGVVLVGQHSH-ASHSGV 341
                                     ..|:.|  ...::...||:|..|........|| .|||| 
Zfish   178 -------------------------KAHYRV--HTGEKPYTCQQCGKSFTKKTTLRSHIISHSG- 214

  Fly   342 GGSVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKA- 405
                                .|||:|:.||..::....|..|.::|:.:|.:.|..||.:|... 
Zfish   215 --------------------EKPFTCDQCGKSYACKDHLDRHMRIHTKDKYFICDQCGSSFKLKE 259

  Fly   406 ---VYLKNHA-----------------------RIHTGEKPYKCQTCGMQFSQSPHLKNHERTHS 444
               .::||||                       |:|||||||.|..||..|||..:|.:|.|.|:
Zfish   260 NFDQHMKNHAEKSLICEQCGRSFFCEATYEKHMRVHTGEKPYSCTECGKSFSQKENLTSHMRIHT 324

  Fly   445 GERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHSGEKPYKCEI 509
            ||:|:.|..|:|.|::...|..|.|:|||||||.|..||..|:|...||.|.:.|:||:||.|..
Zfish   325 GEKPFACEYCEKRFSQLPALKVHMRVHTGEKPYTCAQCGKGFAQKNGLKIHMRTHTGERPYTCMQ 389

  Fly   510 CSAAFADRFALKRHRGIH 527
            |...|..:....||...|
Zfish   390 CGKNFISKETQIRHMKTH 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 61/165 (37%)
C2H2 Zn finger 367..387 CDD:275368 5/19 (26%)
zf-H2C2_2 379..403 CDD:290200 7/23 (30%)
C2H2 Zn finger 395..415 CDD:275368 9/46 (20%)
zf-H2C2_2 407..432 CDD:290200 16/47 (34%)
C2H2 Zn finger 423..443 CDD:275368 9/19 (47%)
zf-H2C2_2 435..460 CDD:290200 11/24 (46%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
zf-H2C2_2 464..488 CDD:290200 14/23 (61%)
COG5048 475..>529 CDD:227381 22/53 (42%)
C2H2 Zn finger 479..499 CDD:275368 8/19 (42%)
zf-H2C2_2 491..515 CDD:290200 10/23 (43%)
C2H2 Zn finger 507..527 CDD:275368 5/19 (26%)
znf1015NP_001025341.1 COG5048 73..409 CDD:227381 113/447 (25%)
C2H2 Zn finger 80..100 CDD:275368 5/19 (26%)
C2H2 Zn finger 108..128 CDD:275368 4/59 (7%)
C2H2 Zn finger 136..156 CDD:275368 4/19 (21%)
zf-H2C2_2 149..173 CDD:290200 6/26 (23%)
C2H2 Zn finger 164..184 CDD:275368 8/69 (12%)
zf-H2C2_2 176..200 CDD:290200 7/70 (10%)
C2H2 Zn finger 192..212 CDD:275368 6/19 (32%)
C2H2 Zn finger 220..240 CDD:275368 5/19 (26%)
C2H2 Zn finger 275..295 CDD:275368 1/19 (5%)
zf-H2C2_2 289..312 CDD:290200 12/22 (55%)
C2H2 Zn finger 303..323 CDD:275368 9/19 (47%)
zf-H2C2_2 315..340 CDD:290200 11/24 (46%)
C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)
zf-H2C2_2 343..368 CDD:290200 14/24 (58%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
zf-H2C2_2 372..396 CDD:290200 11/23 (48%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24381
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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