DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and znf420

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001016394.1 Gene:znf420 / 549148 XenbaseID:XB-GENE-5724906 Length:410 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381
C2H2 Zn finger 367..387 CDD:275368
zf-H2C2_2 379..403 CDD:290200
C2H2 Zn finger 395..415 CDD:275368
zf-H2C2_2 407..432 CDD:290200
C2H2 Zn finger 423..443 CDD:275368
zf-H2C2_2 435..460 CDD:290200
C2H2 Zn finger 451..471 CDD:275368
zf-H2C2_2 464..488 CDD:290200
COG5048 475..>529 CDD:227381
C2H2 Zn finger 479..499 CDD:275368
zf-H2C2_2 491..515 CDD:290200
C2H2 Zn finger 507..527 CDD:275368
znf420NP_001016394.1 CobT <8..>91 CDD:130712
C2H2 Zn finger 102..122 CDD:275368
zf-H2C2_2 118..139 CDD:372612
C2H2 Zn finger 130..150 CDD:275368
COG5048 <141..386 CDD:227381
C2H2 Zn finger 158..178 CDD:275368
C2H2 Zn finger 186..206 CDD:275368
C2H2 Zn finger 214..234 CDD:275368
C2H2 Zn finger 242..262 CDD:275368
C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 298..318 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
C2H2 Zn finger 354..374 CDD:275368
C2H2 Zn finger 382..402 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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