Protein Alignment Clamp and Zfp90

DIOPT Version :10

• Sequence 1: NP_001014498.1
• Gene: Clamp / 35445
• FlyBaseID: FBgn0032979
• Length: 566
• Species: Drosophila melanogaster
• Sequence 2: XP_063134265.1
• Gene: Zfp90 / 498945
• RGDID: 1563077
• Length: 666
• Species: Rattus norvegicus
• Alignment Length: 549
• Identity: 136/549 - (24%)
• Similarity: 202/549 - (36%)
• Gaps: 190/549 - (34%)

  Fly    94 GAALGIATVDAQGRIQIVNQNKPIAANTISN------------------ISFKCDVCSDMFPHLA 140
            |...|::| |...::.:.:..:|....|..|                  ..:|||.|...|.|.:
  Rat   192 GEDSGLST-DLVPQLDVSSSIRPSECKTFGNNLEYNSELVTQSGIPAKKKPYKCDKCRKSFIHRS 255

  Fly   141 LLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQIQIVSSDTLEPVQQ 205
            .||.|:::|.|         :|.:.|....|.|.
  Rat   256 SLNKHEKIHKD---------DAYSNGTDQGVPSG------------------------------- 280

  Fly   206 SVMQQQQHESKASKCINCGSSML-------QQSKRKGPKQVRCESCMQAEQTAQQQQQLFVAQDG 263
                ::.||     |.:||.:.|       .|....|.|...|..|.:|.:.:....|...|..|
  Rat   281 ----RKHHE-----CTDCGKTFLWRTQLTEHQRIHTGEKPFECNVCGKAFRHSSSLGQHENAHTG 336

  Fly   264 QMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKR--------EASSGSGHHPVKKRNSQQMTKCQ 320
            :..:...:.....|..:.|.|.....| |..|.|        ..|:....|.| ..:.::..:|:
  Rat   337 EKPYQCSLCGKAFQRSSSLVQHQRIHT-GEKPYRCNLCGRSFRHSTSLTQHEV-THSGEKPFQCK 399

  Fly   321 KCNG-----SGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSL 380
            :|..     |.:|   ||.. :|:|                     .|||.|:|||..|.:..||
  Rat   400 ECGKAFSRCSSLV---QHER-THTG---------------------EKPFECSICGRAFGQSPSL 439

  Fly   381 W--------------------------------------------------------SHKKLHSG 389
            :                                                        .|:::|:|
  Rat   440 YKHMRIHKRSKPYQSNNFSIAFEPNIPLTQGESVLTDVKSYHCIDCGKDFSHITDFTEHQRIHAG 504

  Fly   390 -------------------EKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPH 435
                               ||.|:|::||.||.::.....|.|||||||||:|..||..||:...
  Rat   505 ENSYDSEQALRQQSLSHPREKPYQCNVCGKAFKRSTSFIEHHRIHTGEKPYECNECGEAFSRLSS 569

  Fly   436 LKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHS 500
            |..|||||:||:||.|..|.|.|::.::|..|.|.|||||||:|..||.||.:..:|.:|.::|:
  Rat   570 LTQHERTHTGEKPYECIDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAFRKKTNLHDHQRIHT 634

  Fly   501 GEKPYKCEICSAAFADRFALKRHRGIHQK 529
            |||||.|:.|...|:...||.:|..||.:
  Rat   635 GEKPYACKECGKNFSRSSALTKHHRIHSR 663

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clamp	NP_001014498.1	COG5048	<359..498	CDD:227381	67/213 (31%)
		C2H2 Zn finger	367..387	CDD:275368	8/75 (11%)
		C2H2 Zn finger	395..415	CDD:275368	7/19 (37%)
		zf-H2C2_2	407..432	CDD:463886	14/24 (58%)
		C2H2 Zn finger	423..443	CDD:275368	9/19 (47%)
		C2H2 Zn finger	451..471	CDD:275368	7/19 (37%)
		COG5048	475..>529	CDD:227381	24/53 (45%)
		C2H2 Zn finger	479..499	CDD:275368	7/19 (37%)
		C2H2 Zn finger	507..527	CDD:275368	6/19 (32%)
Zfp90	XP_063134265.1	None