Protein Alignment Clamp and CG8319

DIOPT Version :10

• Sequence 1: NP_001014498.1
• Gene: Clamp / 35445
• FlyBaseID: FBgn0032979
• Length: 566
• Species: Drosophila melanogaster
• Sequence 2: NP_649920.2
• Gene: CG8319 / 41165
• FlyBaseID: FBgn0037722
• Length: 383
• Species: Drosophila melanogaster
• Alignment Length: 342
• Identity: 96/342 - (28%)
• Similarity: 134/342 - (39%)
• Gaps: 81/342 - (23%)

  Fly   238 QVRCESCMQAEQTA--------QQQQQLFVA-QDGQMAHPVQIISTTP----------------Q 277
            |..|.||:...:||        :..::.::| .:|      |:|...|                :
  Fly    52 QKMCISCVHDARTAYGFKRRCEENYKKFYLAILNG------QVIKDEPNEEDFLFIENPDKGNLE 110

  Fly   278 AQAQLQQIV--AAQTGGTTPKREASSGSGHHPVKKRNSQQMTKCQKC--------NGSGVVLVGQ 332
            |:.:|.:.:  ..||...|.|...::......::...:|.. ||:.|        |....:.|..
  Fly   111 AKKKLNKEIKKTHQTASRTTKSSITTSRAGRQLRSIKNQTF-KCELCIKQFKRQINLLDHMKVHS 174

  Fly   333 HSHASHSGVGGSVKQSVTVKTECLSC----------------RNPSKPFSCNICGGLFSRYSSLW 381
            :||.                  |.:|                ||.:....|..|..:||...||.
  Fly   175 NSHV------------------CQNCEERFLFKADLDNHQCYRNSNSTVECPECLKVFSSTQSLD 221

  Fly   382 SHKKLHSGEKN-YKCSICGLAFAKAVYLKNHARIHT----GEKPYKCQTCGMQFSQSPHLKNHER 441
            |||.....|:: ::|..|..||.:...||.|..||.    |..|:||..|...|.....||.|..
  Fly   222 SHKCKDMQERSPFQCPHCQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKSALKVHIH 286

  Fly   442 THSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHSGEKPYK 506
            .|.||||:.|..|...|.....|..|.|||||||||:|..|...||...:|..|.:.||.|:|||
  Fly   287 AHMGERPHACPFCVSNFRSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRHSDERPYK 351

  Fly   507 CEICSAAFADRFALKRH 523
            |.||...|.::..||||
  Fly   352 CSICLQDFREKHHLKRH 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clamp	NP_001014498.1	COG5048	<359..498	CDD:227381	55/143 (38%)
		C2H2 Zn finger	367..387	CDD:275368	9/19 (47%)
		C2H2 Zn finger	395..415	CDD:275368	7/19 (37%)
		zf-H2C2_2	407..432	CDD:463886	11/28 (39%)
		C2H2 Zn finger	423..443	CDD:275368	6/19 (32%)
		C2H2 Zn finger	451..471	CDD:275368	6/19 (32%)
		COG5048	475..>529	CDD:227381	23/49 (47%)
		C2H2 Zn finger	479..499	CDD:275368	6/19 (32%)
		C2H2 Zn finger	507..527	CDD:275368	8/17 (47%)
CG8319	NP_649920.2	zf-AD	4..79	CDD:462262	6/26 (23%)
		COG5048	<153..368	CDD:227381	75/232 (32%)
		C2H2 Zn finger	153..173	CDD:275368	3/19 (16%)
		C2H2 Zn finger	179..196	CDD:275368	2/16 (13%)
		C2H2 Zn finger	207..227	CDD:275370	9/19 (47%)
		C2H2 Zn finger	236..256	CDD:275368	7/19 (37%)
		C2H2 Zn finger	268..288	CDD:275368	6/19 (32%)
		C2H2 Zn finger	296..316	CDD:275368	6/19 (32%)
		C2H2 Zn finger	324..344	CDD:275368	6/19 (32%)
		C2H2 Zn finger	352..368	CDD:275368	6/15 (40%)