DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and ZNF470

DIOPT Version :10

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001001668.3 Gene:ZNF470 / 388566 HGNCID:22220 Length:717 Species:Homo sapiens


Alignment Length:472 Identity:140/472 - (29%)
Similarity:203/472 - (43%) Gaps:138/472 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 KCDVCSDMFPHLALLNAHKRMHTD---------GEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNI 183
            ||:.|..:|..::.|..|:|:||.         |:...|..|.||                    
Human   229 KCNDCEKIFSKISTLTLHQRIHTGEKPYECIECGKAFSQSAHLAQ-------------------- 273

  Fly   184 IGNGQMGQIQIVSSDTLEPVQQSVMQQQQHE-SKASKCINCGSSMLQ-------QSKRKGPKQVR 240
                                     .|:.|. .|..:|..||.:..|       |....|.|..:
Human   274 -------------------------HQRIHTGEKPFECTECGKAFSQNAHLVQHQRVHTGEKPYQ 313

  Fly   241 CESCMQAEQTAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKR-------- 297
            |:.|.:|              ..|:||           .||.|::..    |..|..        
Human   314 CKQCNKA--------------FSQLAH-----------LAQHQRVHT----GEKPYECIECGKAF 349

  Fly   298 -EASSGSGHHPVKK-RNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSC-- 358
             :.||.:.|..:.. :...:...|.|.......|: :|....|:|         ....:|:.|  
Human   350 SDCSSLAHHRRIHTGKRPYECIDCGKAFRQNASLI-RHRRYYHTG---------EKPFDCIDCGK 404

  Fly   359 --------------RNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLK 409
                          ....:|:.||:||..||..|||..|:::|:|||.|:|:||..||:....|.
Human   405 AFTDHIGLIQHKRTHTGERPYKCNVCGKAFSHGSSLTVHQRIHTGEKPYECNICEKAFSHRGSLT 469

  Fly   410 NHARIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGE 474
            .|.|:|||||||:|:.||..|.||.||.:|:|.|:||:||.|..|.|.|:::|.|..|::|||||
Human   470 LHQRVHTGEKPYECKECGKAFRQSTHLAHHQRIHTGEKPYECKECSKTFSQNAHLAQHQKIHTGE 534

  Fly   475 KPYKCEICGSAFSQAAHLKNHAKVHSGEKPYKCEICSAAFADRFALKRHRGIHQ--------KYG 531
            |||:|:.||.||||.|||..|.:||:|||||:|..|..||:|...|.:|:.:|.        :.|
Human   535 KPYECKECGKAFSQIAHLVQHQRVHTGEKPYECIECGKAFSDGSYLVQHQRLHSGKRPYECLECG 599

  Fly   532 QTAPRQTSSDGMIVHKQ 548
            : |.||.:|  :|.|::
Human   600 K-AFRQRAS--LICHQR 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 72/138 (52%)
C2H2 Zn finger 367..387 CDD:275368 10/19 (53%)
C2H2 Zn finger 395..415 CDD:275368 8/19 (42%)
zf-H2C2_2 407..432 CDD:463886 14/24 (58%)
C2H2 Zn finger 423..443 CDD:275368 10/19 (53%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
COG5048 475..>529 CDD:227381 29/61 (48%)
C2H2 Zn finger 479..499 CDD:275368 11/19 (58%)
C2H2 Zn finger 507..527 CDD:275368 7/19 (37%)
ZNF470NP_001001668.3 KRAB 23..83 CDD:214630
Nuclear localization signal. /evidence=ECO:0000255 216..219
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
COG5048 254..669 CDD:227381 131/447 (29%)
C2H2 Zn finger 258..278 CDD:275368 6/64 (9%)
C2H2 Zn finger 286..306 CDD:275368 5/19 (26%)
C2H2 Zn finger 314..334 CDD:275368 9/44 (20%)
C2H2 Zn finger 342..362 CDD:275368 3/19 (16%)
C2H2 Zn finger 370..388 CDD:275368 4/18 (22%)
Nuclear localization signal. /evidence=ECO:0000255 385..388 1/2 (50%)
C2H2 Zn finger 399..419 CDD:275368 2/19 (11%)
C2H2 Zn finger 427..447 CDD:275368 10/19 (53%)
C2H2 Zn finger 455..475 CDD:275368 8/19 (42%)
C2H2 Zn finger 483..503 CDD:275368 10/19 (53%)
C2H2 Zn finger 511..531 CDD:275368 7/19 (37%)
C2H2 Zn finger 539..559 CDD:275368 11/19 (58%)
C2H2 Zn finger 567..587 CDD:275368 7/19 (37%)
C2H2 Zn finger 595..615 CDD:275368 7/22 (32%)
C2H2 Zn finger 623..643 CDD:275368
C2H2 Zn finger 651..671 CDD:275368
zf-H2C2_2 663..688 CDD:463886
C2H2 Zn finger 679..699 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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