DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Zfp157

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_038945496.1 Gene:Zfp157 / 360775 RGDID:1359435 Length:569 Species:Rattus norvegicus


Alignment Length:423 Identity:114/423 - (26%)
Similarity:166/423 - (39%) Gaps:122/423 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 FKCDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQ 191
            ::|..|...||..:.|..|.|:|| ||                                      
  Rat   185 YQCTECRKAFPSKSELTVHHRIHT-GE-------------------------------------- 210

  Fly   192 IQIVSSDTLEPVQQSVMQQQQHESKASKCINCGSSM-------LQQSKRKGPKQVRCESCMQA-- 247
                                    |..:|..||.:.       :.|...:|.|...|:.|.:|  
  Rat   211 ------------------------KPHECDECGKAFYRKSTLTVHQKTHRGEKPYECKECCKAFY 251

  Fly   248 -EQTAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKR 311
             :.|..:.|::...:                     :..|..:.|.....:  |:.:.||  :..
  Rat   252 YKSTLTEHQRIHTGE---------------------KPYVCKECGKAFFYK--SNLTRHH--RTH 291

  Fly   312 NSQQMTKCQKCNG--SGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLF 374
            ..::..:|::|..  |....:..| |.:|:|                     .||:.|..||..|
  Rat   292 TGEKPYECEECRKGFSSKSELTSH-HRTHTG---------------------EKPYQCEECGKAF 334

  Fly   375 SRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNH 439
            ...|:|..|:|:|:|||.|:|..|..:|.....|..|.|.|||||||:|:.||..|.....|..|
  Rat   335 YCKSTLRVHQKIHTGEKPYECKECQKSFYYKSTLTEHQRTHTGEKPYECKDCGKAFFYKSQLTRH 399

  Fly   440 ERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHSGEKP 504
            .|.|:||:||.|..|.|.|:..:.|..|.|.|||||||:||.||..|.:.:||..|.::|:||||
  Rat   400 HRIHTGEKPYECEECRKAFSSKSELTAHHRTHTGEKPYECEECGKCFCRKSHLTLHHRIHTGEKP 464

  Fly   505 YKCEICSAAFADRFALKRHRGIHQKYGQTAPRQ 537
            |:|:.|..||..:..|.||.|.|.....|..|:
  Rat   465 YECKDCRKAFFCKSGLARHLGTHTHGTNTKNRE 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 62/138 (45%)
C2H2 Zn finger 367..387 CDD:275368 8/19 (42%)
zf-H2C2_2 379..403 CDD:290200 10/23 (43%)
C2H2 Zn finger 395..415 CDD:275368 6/19 (32%)
zf-H2C2_2 407..432 CDD:290200 14/24 (58%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 435..460 CDD:290200 12/24 (50%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
zf-H2C2_2 464..488 CDD:290200 15/23 (65%)
COG5048 475..>529 CDD:227381 26/53 (49%)
C2H2 Zn finger 479..499 CDD:275368 8/19 (42%)
zf-H2C2_2 491..515 CDD:290200 12/23 (52%)
C2H2 Zn finger 507..527 CDD:275368 8/19 (42%)
Zfp157XP_038945496.1 KRAB 5..65 CDD:214630
C2H2 Zn finger 160..179 CDD:275368
COG5048 183..529 CDD:227381 114/423 (27%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 215..235 CDD:275368 4/19 (21%)
C2H2 Zn finger 243..263 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 4/23 (17%)
C2H2 Zn finger 299..319 CDD:275368 5/20 (25%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
C2H2 Zn finger 355..375 CDD:275368 6/19 (32%)
C2H2 Zn finger 383..403 CDD:275368 7/19 (37%)
C2H2 Zn finger 411..431 CDD:275368 7/19 (37%)
C2H2 Zn finger 439..459 CDD:275368 8/19 (42%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24381
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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