DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Kr-h1

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381
C2H2 Zn finger 367..387 CDD:275368
zf-H2C2_2 379..403 CDD:290200
C2H2 Zn finger 395..415 CDD:275368
zf-H2C2_2 407..432 CDD:290200
C2H2 Zn finger 423..443 CDD:275368
zf-H2C2_2 435..460 CDD:290200
C2H2 Zn finger 451..471 CDD:275368
zf-H2C2_2 464..488 CDD:290200
COG5048 475..>529 CDD:227381
C2H2 Zn finger 479..499 CDD:275368
zf-H2C2_2 491..515 CDD:290200
C2H2 Zn finger 507..527 CDD:275368
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368
COG5048 <270..420 CDD:227381
zf-C2H2 271..293 CDD:278523
C2H2 Zn finger 273..293 CDD:275368
zf-H2C2_2 286..309 CDD:290200
C2H2 Zn finger 301..321 CDD:275368
zf-H2C2_2 313..338 CDD:290200
C2H2 Zn finger 329..349 CDD:275368
zf-H2C2_2 344..366 CDD:290200
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 370..396 CDD:290200
C2H2 Zn finger 385..407 CDD:275368
zf-H2C2_2 400..424 CDD:290200
C2H2 Zn finger 415..435 CDD:275368
zf-C2H2 441..463 CDD:278523
C2H2 Zn finger 443..463 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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