Protein Alignment Clamp and CG31441

DIOPT Version :10

• Sequence 1: NP_001014498.1
• Gene: Clamp / 35445
• FlyBaseID: FBgn0032979
• Length: 566
• Species: Drosophila melanogaster
• Sequence 2: NP_731558.1
• Gene: CG31441 / 326139
• FlyBaseID: FBgn0051441
• Length: 341
• Species: Drosophila melanogaster
• Alignment Length: 28
• Identity: 9/28 - (32%)
• Similarity: 14/28 - (50%)
• Gaps: 2/28 - (7%)

  Fly   521 LNCYMKQYGVTKEEASRELRKMYVYRKK 548
            ::||..|.  .|...|:..||..:.:||
  Fly    69 ISCYTGQR--EKCTTSQTCRKYNLLKKK 94

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clamp	NP_001014498.1	COG5048	<359..498	CDD:227381
		C2H2 Zn finger	367..387	CDD:275368
		C2H2 Zn finger	395..415	CDD:275368
		zf-H2C2_2	407..432	CDD:463886
		C2H2 Zn finger	423..443	CDD:275368
		C2H2 Zn finger	451..471	CDD:275368
		COG5048	475..>529	CDD:227381	3/7 (43%)
		C2H2 Zn finger	479..499	CDD:275368
		C2H2 Zn finger	507..527	CDD:275368	2/5 (40%)
CG31441	NP_731558.1	zf-AD	7..81	CDD:462262	4/13 (31%)
		COG5048	<174..337	CDD:227381
		C2H2 Zn finger	197..217	CDD:275370
		C2H2 Zn finger	225..245	CDD:275368
		C2H2 Zn finger	253..273	CDD:275368
		zf-H2C2_2	269..290	CDD:463886
		C2H2 Zn finger	281..301	CDD:275368
		C2H2 Zn finger	309..328	CDD:275368