DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Zfp707

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001129369.1 Gene:Zfp707 / 315088 RGDID:1311188 Length:390 Species:Rattus norvegicus


Alignment Length:288 Identity:85/288 - (29%)
Similarity:127/288 - (44%) Gaps:45/288 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 TAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHP-----VK 309
            :::.::|..|...|:.|          .|..:......|::..|..|...:||..|..     .|
  Rat   105 SSELERQKSVCPGGRKA----------SAPEKTHSRTGAKSRTTLRKNVLTSGKAHFTRATSGRK 159

  Fly   310 KRNSQQMTKCQKCNGS-----GVVLVGQHSHASHSGVGGSVKQSVTVKTECLSCRNPSKPFSCNI 369
            ..|..:..:.|.|..|     |:...|:.:...|                         ||.|.|
  Rat   160 LDNKSEALQNQTCGKSRRRQPGLKEQGKSAAEGH-------------------------PFICGI 199

  Fly   370 CGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSP 434
            ||...|.:|.|.:|:.:|:|.::::|..||..|.....|..|.|.||.|||:.|:.||..||...
  Rat   200 CGKALSCHSRLAAHQTVHTGTRSFECFECGQTFRWVSNLLRHQRNHTSEKPFCCEVCGQAFSLKD 264

  Fly   435 HLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVH 499
            .|..|::.|:..|||||..|.|.|.:.:.|..|:.:||||:|:.|:.||..|....:|.:|.::|
  Rat   265 RLAQHQKIHTEHRPYVCSDCGKAFKQKSNLLRHKLVHTGERPFYCDNCGKTFRTKENLNHHQRIH 329

  Fly   500 SGEKPYKCEICSAAFADRFALKRHRGIH 527
            ||||||.|..|..||........|:.:|
  Rat   330 SGEKPYTCGECGKAFRWPKGFSIHQRLH 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 53/138 (38%)
C2H2 Zn finger 367..387 CDD:275368 8/19 (42%)
zf-H2C2_2 379..403 CDD:290200 7/23 (30%)
C2H2 Zn finger 395..415 CDD:275368 7/19 (37%)
zf-H2C2_2 407..432 CDD:290200 12/24 (50%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 435..460 CDD:290200 11/24 (46%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
zf-H2C2_2 464..488 CDD:290200 11/23 (48%)
COG5048 475..>529 CDD:227381 20/53 (38%)
C2H2 Zn finger 479..499 CDD:275368 6/19 (32%)
zf-H2C2_2 491..515 CDD:290200 12/23 (52%)
C2H2 Zn finger 507..527 CDD:275368 5/19 (26%)
Zfp707NP_001129369.1 KRAB 40..100 CDD:214630
KRAB 40..76 CDD:279668
C2H2 Zn finger 197..217 CDD:275368 8/19 (42%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
zf-H2C2_2 237..261 CDD:290200 11/23 (48%)
COG5048 <249..385 CDD:227381 44/109 (40%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
zf-H2C2_2 266..290 CDD:290200 11/23 (48%)
zf-C2H2 279..301 CDD:278523 8/21 (38%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 293..318 CDD:290200 11/24 (46%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 321..344 CDD:290200 11/22 (50%)
C2H2 Zn finger 337..357 CDD:275368 5/19 (26%)
C2H2 Zn finger 365..385 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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