DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Zfp362

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001178541.1 Gene:Zfp362 / 297879 RGDID:1306498 Length:418 Species:Rattus norvegicus


Alignment Length:291 Identity:94/291 - (32%)
Similarity:133/291 - (45%) Gaps:40/291 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 TTPQAQAQLQQIVAAQT---GGTTPK--REASSGSGH---HPVKKRNSQQMTKCQKCNGSGVVLV 330
            :||...:|.:.|.::.|   |.|:|.  ....:..||   .|.|....::..|.:...|..|::|
  Rat   144 STPTTTSQSRLIASSPTLISGITSPPLLDSIKTIQGHGLLGPPKSERGRKKIKAENPGGPPVLVV 208

  Fly   331 GQHSHASHSGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKC 395
            .....||    |.:.|:              .|.:.|.:|...|...|.:..|.|.|:..|.:||
  Rat   209 PYPILAS----GETAKE--------------GKTYRCKVCPLTFFTKSEMQIHSKSHTEAKPHKC 255

  Fly   396 SICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVC---GVCDKG 457
            ..|..:||.|.||..|.|||.|.|||.|..|...|.|..||:.|.|.|:|:|||.|   | |:|.
  Rat   256 PHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRPYKCPHPG-CEKA 319

  Fly   458 FARHATLWNHRRIHTGEKPYKCEICGSAFSQAA----HLKNHAKVHSGEKPYKCEICSAAFADRF 518
            |.:.:.|.:|:|.|..:|||||..|..|:|.:|    ||..||..|:  |.|.|.:|..|:....
  Rat   320 FTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSAHAIKHA--KAYCCSMCGRAYTSET 382

  Fly   519 ALKRHRGIH----QKYGQTAPRQTSSDGMIV 545
            .|.:|...|    ......:|::|.|.|:.|
  Rat   383 YLMKHMSKHTVVEHLVSHHSPQRTESPGIPV 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 60/145 (41%)
C2H2 Zn finger 367..387 CDD:275368 6/19 (32%)
zf-H2C2_2 379..403 CDD:290200 7/23 (30%)
C2H2 Zn finger 395..415 CDD:275368 9/19 (47%)
zf-H2C2_2 407..432 CDD:290200 13/24 (54%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
zf-H2C2_2 435..460 CDD:290200 14/27 (52%)
C2H2 Zn finger 451..471 CDD:275368 8/22 (36%)
zf-H2C2_2 464..488 CDD:290200 11/23 (48%)
COG5048 475..>529 CDD:227381 22/61 (36%)
C2H2 Zn finger 479..499 CDD:275368 9/23 (39%)
zf-H2C2_2 491..515 CDD:290200 10/23 (43%)
C2H2 Zn finger 507..527 CDD:275368 5/19 (26%)
Zfp362NP_001178541.1 PRK14971 <27..>131 CDD:237874
C2H2 Zn finger 227..247 CDD:275368 6/19 (32%)
zf-H2C2_2 239..264 CDD:404364 8/24 (33%)
zf-C2H2 253..275 CDD:395048 10/21 (48%)
C2H2 Zn finger 255..275 CDD:275368 9/19 (47%)
zf-H2C2_2 267..292 CDD:404364 13/24 (54%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
SFP1 <305..357 CDD:227516 22/52 (42%)
C2H2 Zn finger 311..333 CDD:275368 8/22 (36%)
C2H2 Zn finger 341..361 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..391 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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