DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Clamp and ZNF852

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001274278.1 Gene:ZNF852 / 285346 HGNCID:27713 Length:530 Species:Homo sapiens


Alignment Length:478 Identity:139/478 - (29%)
Similarity:213/478 - (44%) Gaps:94/478 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VNGMPLN-QGAALGI------------ATVDAQGRIQIVNQNKPIAANTISN-------ISFKCD 130
            :.|.|.| :|:.|..            :|.|.....:.|.::.|::::.:.:       .|::||
Human    98 LEGQPSNEEGSRLESDFLEIIDEDKKKSTKDRYEEYKEVEEHPPLSSSPVEHEGVLKGQKSYRCD 162

  Fly   131 VCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQIQIV 195
            .|...|...:.|..|:|:|| ||:..:                            ..:.|:    
Human   163 ECGKAFYWSSHLIGHRRIHT-GEKPYE----------------------------CNECGK---- 194

  Fly   196 SSDTLEPVQQSVMQQQQHE-SKASKCINCG-----SSMLQQSKR--KGPKQVRCESCMQAEQTAQ 252
               |.....|.::..:.|. .|..:|..||     ||.|.|.:|  .|.|..:|..|.:|   ..
Human   195 ---TFRQTSQLIVHLRTHTGEKPYECSECGKAYRHSSHLIQHQRLHNGEKPYKCNECAKA---FN 253

  Fly   253 QQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKRNSQQMT 317
            |..:||   |.|..|       |.:...:.::..||.:......|.....:|..|.         
Human   254 QSSKLF---DHQRTH-------TGEKPYECKECGAAFSRSKNLVRHQFLHTGKKPY--------- 299

  Fly   318 KCQKCN----GSGVVLVGQHSHASHSGVGGSVKQSVTVKTECL----SCRNPSKPFSCNICGGLF 374
            ||.:|.    .:..::..|.:|........:.......:::||    |.....||:.|:.||..|
Human   300 KCNECGRAFCSNRNLIDHQRTHTGEKPYKCNECGKAFSRSKCLIRHQSLHTGEKPYKCSECGKAF 364

  Fly   375 SRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNH 439
            ::.|.|..|:::|:|||.:|||.||.||..:..|..|.|:||.||||||..||..|:|:.:|..|
Human   365 NQISQLVEHERIHTGEKPFKCSECGKAFGLSKCLIRHQRLHTSEKPYKCNECGKSFNQNSYLIIH 429

  Fly   440 ERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHSGEKP 504
            :|.|:||:||.|..|.|.|:.:::|..|:|.|||||||||..||.|||.::.|..|.:||:||||
Human   430 QRIHTGEKPYECNECGKVFSYNSSLMVHQRTHTGEKPYKCNSCGKAFSDSSQLTVHQRVHTGEKP 494

  Fly   505 YKCEICSAAFADRFALKRHRGIH 527
            |:|..|..||:.|.....|:..|
Human   495 YECIECGKAFSQRSTFNHHQRTH 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 66/138 (48%)
C2H2 Zn finger 367..387 CDD:275368 7/19 (37%)
zf-H2C2_2 379..403 CDD:290200 12/23 (52%)
C2H2 Zn finger 395..415 CDD:275368 9/19 (47%)
zf-H2C2_2 407..432 CDD:290200 14/24 (58%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
zf-H2C2_2 435..460 CDD:290200 12/24 (50%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
zf-H2C2_2 464..488 CDD:290200 16/23 (70%)
COG5048 475..>529 CDD:227381 26/53 (49%)
C2H2 Zn finger 479..499 CDD:275368 8/19 (42%)
zf-H2C2_2 491..515 CDD:290200 12/23 (52%)
C2H2 Zn finger 507..527 CDD:275368 6/19 (32%)
ZNF852NP_001274278.1 KRAB_A-box 8..47 CDD:143639
COG5048 156..514 CDD:227381 128/415 (31%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 177..198 CDD:290200 8/56 (14%)
C2H2 Zn finger 189..209 CDD:275368 3/26 (12%)
zf-H2C2_2 202..226 CDD:290200 5/23 (22%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 8/25 (32%)
zf-H2C2_2 261..282 CDD:290200 5/27 (19%)
C2H2 Zn finger 273..293 CDD:275368 3/19 (16%)
zf-C2H2 299..321 CDD:278523 4/30 (13%)
C2H2 Zn finger 301..321 CDD:275368 3/19 (16%)
zf-H2C2_2 313..338 CDD:290200 2/24 (8%)
C2H2 Zn finger 329..349 CDD:275368 3/19 (16%)
zf-H2C2_2 342..366 CDD:290200 8/23 (35%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
zf-H2C2_2 370..392 CDD:290200 11/21 (52%)
C2H2 Zn finger 385..405 CDD:275368 9/19 (47%)
zf-H2C2_2 398..422 CDD:290200 14/23 (61%)
C2H2 Zn finger 413..433 CDD:275368 8/19 (42%)
zf-H2C2_2 425..450 CDD:290200 12/24 (50%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
zf-H2C2_2 453..477 CDD:290200 15/23 (65%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
zf-H2C2_2 482..506 CDD:290200 13/23 (57%)
C2H2 Zn finger 497..517 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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