Protein Alignment Clamp and Zscan26

DIOPT Version :9

• Sequence 1: NP_001014498.1
• Gene: Clamp / 35445
• FlyBaseID: FBgn0032979
• Length: 566
• Species: Drosophila melanogaster
• Sequence 2: XP_017456272.1
• Gene: Zscan26 / 266792
• RGDID: 727885
• Length: 465
• Species: Rattus norvegicus
• Alignment Length: 422
• Identity: 120/422 - (28%)
• Similarity: 174/422 - (41%)
• Gaps: 105/422 - (24%)

  Fly   154 QQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQIQIVSSDTL------EPVQQSVMQQQQ 212
            |.|..:|:.:.|.|.:.::....|       ..|:.|:.:..:..|.      ||......|:|.
  Rat    99 QVQVLEHHPETGEDLVGILEDLQL-------DRGKAGEQKDSAQRTRPTVLVGEPAPHREAQEQP 156

  Fly   213 HESKASKCINCGSSMLQQSKRKGPKQVRCE---------SCMQAEQTAQQQQQLFVAQDGQMAHP 268
                       |..:|:..:|  .|:.|.|         ||.:.|.:.            .|:.|
  Rat   157 -----------GFVVLKPEER--GKETRSENGKFTGGIDSCGRVESSC------------TMSEP 196

  Fly   269 VQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKRNSQQM-TKCQKCNGSGVVLVGQ 332
            ::                 ||....:.|:..:...|     |.|||.: ||.:....||::
  Rat   197 IE-----------------AQCEDLSLKKYPAMPKG-----KTNSQCLETKERLVQNSGLI---- 235

  Fly   333 HSHASHSGVGG--SVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKC 395
            ....:|:|...  ||....:|.||.... :..|...|..||.:|.|.|.|..|:|:|.|||.|:|
  Rat   236 ERDRTHTGERSCESVVYQSSVATEHQEI-SKEKGHPCQECGKVFQRSSHLIRHQKIHLGEKPYQC 299

  Fly   396 SICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFAR 460
            ..||..|::...|..|.|||||||||.|..||..|.:|.||..|::.||.:.|..|..|.|.|:|
  Rat   300 KECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQKIHSQDEPRECKECGKTFSR 364

  Fly   461 HATLWNHR----------------------------RIHTGEKPYKCEICGSAFSQAAHLKNHAK 497
            ...|.:|:                            ||||||||:||.:|..||...:||..|.:
  Rat   365 ALLLTHHQRVHGRSKRHHCNECGKAFSLTSDLIRHHRIHTGEKPFKCNVCQKAFRLNSHLDQHVR 429

  Fly   498 VHSGEKPYKCEICSAAFADRFALKRHRGIHQK 529
            :|:.||.|||..|:.||..:..|.:|:..|.|
  Rat   430 IHNEEKLYKCSECNEAFRQKSGLFQHQRHHHK 461

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clamp	NP_001014498.1	COG5048	<359..498	CDD:227381	64/166 (39%)
		C2H2 Zn finger	367..387	CDD:275368	9/19 (47%)
		zf-H2C2_2	379..403	CDD:290200	11/23 (48%)
		C2H2 Zn finger	395..415	CDD:275368	7/19 (37%)
		zf-H2C2_2	407..432	CDD:290200	15/24 (63%)
		C2H2 Zn finger	423..443	CDD:275368	8/19 (42%)
		zf-H2C2_2	435..460	CDD:290200	10/24 (42%)
		C2H2 Zn finger	451..471	CDD:275368	8/47 (17%)
		zf-H2C2_2	464..488	CDD:290200	15/51 (29%)
		COG5048	475..>529	CDD:227381	22/53 (42%)
		C2H2 Zn finger	479..499	CDD:275368	7/19 (37%)
		zf-H2C2_2	491..515	CDD:290200	11/23 (48%)
		C2H2 Zn finger	507..527	CDD:275368	6/19 (32%)
Zscan26	XP_017456272.1	SCAN	43..148	CDD:413396	11/55 (20%)
		COG5048	<194..422	CDD:227381	81/254 (32%)
		C2H2 Zn finger	247..263	CDD:275368	5/15 (33%)
		C2H2 Zn finger	271..291	CDD:275368	9/19 (47%)
		C2H2 Zn finger	299..319	CDD:275368	7/19 (37%)
		C2H2 Zn finger	327..347	CDD:275368	8/19 (42%)
		C2H2 Zn finger	355..375	CDD:275368	7/19 (37%)
		C2H2 Zn finger	383..403	CDD:275368	1/19 (5%)
		C2H2 Zn finger	411..431	CDD:275368	7/19 (37%)
		C2H2 Zn finger	439..459	CDD:275368	6/19 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000