DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Zfp260

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_036111.2 Gene:Zfp260 / 26466 MGIID:1347071 Length:407 Species:Mus musculus


Alignment Length:413 Identity:122/413 - (29%)
Similarity:171/413 - (41%) Gaps:96/413 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 SFKCDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMG 190
            |:||..|...|.......:|::.||:....:                                  
Mouse    78 SYKCGECGKAFSQRGNFLSHQKQHTEERPSE---------------------------------- 108

  Fly   191 QIQIVSSDTLEPVQQSVMQQQQHESKASKCINCGSSMLQQSKRK-------GPKQVRCESCMQAE 248
                 |..|..|:..:|..|:...:|...|..||.:...:|..|       |.|...|..|.:| 
Mouse   109 -----SKKTPVPMTTTVRNQRNTGNKPYACKECGKAFNGKSYLKEHEKIHTGEKPFECSQCGRA- 167

  Fly   249 QTAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKRNS 313
              ..|:|.|...|:..........:...:|.:|.:.::..|...|          |..|      
Mouse   168 --FSQKQYLIKHQNIHSGKKPFKCNECGKAFSQKENLIIHQRIHT----------GEKP------ 214

  Fly   314 QQMTKCQKCNGSGVVLVGQHS----HASHSGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLF 374
                  .:|.|.|...:.:.|    ..||:|                     .||::|..||..|
Mouse   215 ------YECKGCGKAFIQKSSLIRHQRSHTG---------------------EKPYTCKECGKAF 252

  Fly   375 SRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNH 439
            |..|:|..|:|:|.|||.|||:.||..|.:..||..|..||||||||:|..||..||:...|..|
Mouse   253 SGKSNLTEHEKIHIGEKPYKCNECGTIFRQKQYLIKHHNIHTGEKPYECNKCGKAFSRITSLIVH 317

  Fly   440 ERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHSGEKP 504
            .|.|:|::||.|.:|.|.|.:.::|..|.|.|||||||.|..||.||||.:.|..|.::|:||||
Mouse   318 VRIHTGDKPYECKICGKAFCQSSSLTVHMRSHTGEKPYGCNECGKAFSQFSTLALHMRIHTGEKP 382

  Fly   505 YKCEICSAAFADRFALKRHRGIH 527
            |:|..|..||:.:....||:.||
Mouse   383 YQCSECGKAFSQKSHHIRHQRIH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 67/138 (49%)
C2H2 Zn finger 367..387 CDD:275368 9/19 (47%)
zf-H2C2_2 379..403 CDD:290200 12/23 (52%)
C2H2 Zn finger 395..415 CDD:275368 7/19 (37%)
zf-H2C2_2 407..432 CDD:290200 15/24 (63%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
zf-H2C2_2 435..460 CDD:290200 11/24 (46%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
zf-H2C2_2 464..488 CDD:290200 15/23 (65%)
COG5048 475..>529 CDD:227381 26/53 (49%)
C2H2 Zn finger 479..499 CDD:275368 9/19 (47%)
zf-H2C2_2 491..515 CDD:290200 11/23 (48%)
C2H2 Zn finger 507..527 CDD:275368 6/19 (32%)
Zfp260NP_036111.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
COG5048 22..401 CDD:227381 118/407 (29%)
C2H2 Zn finger 25..45 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..72
C2H2 Zn finger 53..73 CDD:275368
C2H2 Zn finger 81..101 CDD:275368 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..124 7/66 (11%)
C2H2 Zn finger 133..153 CDD:275368 5/19 (26%)
C2H2 Zn finger 161..181 CDD:275368 7/22 (32%)
C2H2 Zn finger 189..209 CDD:275368 3/19 (16%)
C2H2 Zn finger 217..237 CDD:275368 4/19 (21%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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