DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Ikzf3

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_035901.1 Gene:Ikzf3 / 22780 MGIID:1342542 Length:507 Species:Mus musculus


Alignment Length:185 Identity:60/185 - (32%)
Similarity:89/185 - (48%) Gaps:32/185 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 FSRYSSL-------WSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFS 431
            :|.|.|:       :.:.:...|:.|  |.:|||:......|..|.|.||||:|::|..||..|:
Mouse    93 YSDYESIKLERHVPYDNSRPTGGKMN--CDVCGLSCISFNVLMVHKRSHTGERPFQCNQCGASFT 155

  Fly   432 QSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNH- 495
            |..:|..|.:.|:||:|:.|.:|:....|...|..|.|.|:.|||||||.||.::.|.:.|:.| 
Mouse   156 QKGNLLRHIKLHTGEKPFKCHLCNYACQRRDALTGHLRTHSVEKPYKCEFCGRSYKQRSSLEEHK 220

  Fly   496 ---------------AKVHSGEKPYKCEICS--AAFADRFA---LKRHRGIHQKY 530
                           |.|.:  :..|.|:.|  |...||.|   .||...:.||:
Mouse   221 ERCRAFLQNPDLGDAASVEA--RHIKAEMGSERALVLDRLASNVAKRKSSMPQKF 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 48/146 (33%)
C2H2 Zn finger 367..387 CDD:275368 3/19 (16%)
zf-H2C2_2 379..403 CDD:290200 7/30 (23%)
C2H2 Zn finger 395..415 CDD:275368 7/19 (37%)
zf-H2C2_2 407..432 CDD:290200 12/24 (50%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 435..460 CDD:290200 8/24 (33%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
zf-H2C2_2 464..488 CDD:290200 13/23 (57%)
COG5048 475..>529 CDD:227381 22/74 (30%)
C2H2 Zn finger 479..499 CDD:275368 8/35 (23%)
zf-H2C2_2 491..515 CDD:290200 8/41 (20%)
C2H2 Zn finger 507..527 CDD:275368 8/24 (33%)
Ikzf3NP_035901.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..85
COG5048 <105..>218 CDD:227381 43/114 (38%)
C2H2 Zn finger 119..139 CDD:275368 7/19 (37%)
zf-H2C2_2 132..156 CDD:290200 12/23 (52%)
C2H2 Zn finger 147..167 CDD:275368 7/19 (37%)
zf-H2C2_2 159..182 CDD:290200 8/22 (36%)
C2H2 Zn finger 175..195 CDD:275368 6/19 (32%)
zf-H2C2_2 191..212 CDD:290200 12/20 (60%)
C2H2 Zn finger 203..219 CDD:275368 6/15 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..396
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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