DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Zfp90

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001355257.1 Gene:Zfp90 / 22751 MGIID:104786 Length:656 Species:Mus musculus


Alignment Length:498 Identity:132/498 - (26%)
Similarity:190/498 - (38%) Gaps:153/498 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 TISNI-----SFKCDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQA 180
            |.|||     .:|||.|...|.|.:.||.|:::|............||:|               
Mouse   217 TQSNILAKKKPYKCDKCRKSFIHRSSLNKHEKIHKGDPYSNGTDQGAQSG--------------- 266

  Fly   181 QNIIGNGQMGQIQIVSSDTLEPVQQSVMQQQQHESKASKCINCGSSML-------QQSKRKGPKQ 238
                                         ::.||     |.:||.:.|       .|....|.|.
Mouse   267 -----------------------------RKHHE-----CADCGKTFLWRTQLTEHQRIHTGEKP 297

  Fly   239 VRCESCMQAEQTAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKR------ 297
            ..|..|.:|.:.:....|...|..|:..:...:.....|..:.|.|.....| |..|.|      
Mouse   298 FECNVCGKAFRHSSSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQHQRIHT-GEKPYRCNLCGR 361

  Fly   298 --EASSGSGHHPVKKRNSQQMTKCQKCNG-----SGVVLVGQHSHASHSGVGGSVKQSVTVKTEC 355
              ..|:....|.| ..:.::..:|::|..     |.:|   ||.. :|:|         ....||
Mouse   362 SFRHSTSLTQHEV-THSGEKPFQCKECGKAFSRCSSLV---QHER-THTG---------EKPFEC 412

  Fly   356 LSC-----RNPS---------------------------------------KPFSCNICGGLFSR 376
            ..|     ::||                                       |.:.||.||..|..
Mouse   413 SICGRAFGQSPSLYKHMRIHKRSKPYQSNNFSLAFVPNTPLPQGEGLLTEVKSYHCNDCGKDFGH 477

  Fly   377 YSSLWSHKKLHSG--------------------EKNYKCSICGLAFAKAVYLKNHARIHTGEKPY 421
            .:....|::||:|                    ||.|:|::||.||.::.....|.|||||||||
Mouse   478 ITDFSEHQRLHAGENSYGSEQTLLGQQSLSHPREKPYQCNVCGKAFKRSTSFIEHHRIHTGEKPY 542

  Fly   422 KCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAF 486
            :|..||..||:...|..|||||:||:||.|..|.|.|::.::|..|.|.|||||||:|..||.||
Mouse   543 ECNECGEAFSRLSSLTQHERTHTGEKPYECIDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAF 607

  Fly   487 SQAAHLKNHAKVHSGEKPYKCEICSAAFADRFALKRHRGIHQK 529
            .:..:|.:|.:.|:|||||.|:.|...|:...||.:|..:|.:
Mouse   608 RKKTNLHDHQRTHTGEKPYACKECGRNFSRSSALTKHHRVHAR 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 66/197 (34%)
C2H2 Zn finger 367..387 CDD:275368 6/19 (32%)
zf-H2C2_2 379..403 CDD:290200 11/43 (26%)
C2H2 Zn finger 395..415 CDD:275368 7/19 (37%)
zf-H2C2_2 407..432 CDD:290200 14/24 (58%)
C2H2 Zn finger 423..443 CDD:275368 9/19 (47%)
zf-H2C2_2 435..460 CDD:290200 14/24 (58%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
zf-H2C2_2 464..488 CDD:290200 15/23 (65%)
COG5048 475..>529 CDD:227381 23/53 (43%)
C2H2 Zn finger 479..499 CDD:275368 7/19 (37%)
zf-H2C2_2 491..515 CDD:290200 10/23 (43%)
C2H2 Zn finger 507..527 CDD:275368 6/19 (32%)
Zfp90NP_001355257.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24381
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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