DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and ZNF555

DIOPT Version :10

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_011526018.1 Gene:ZNF555 / 148254 HGNCID:28382 Length:630 Species:Homo sapiens


Alignment Length:453 Identity:119/453 - (26%)
Similarity:177/453 - (39%) Gaps:118/453 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 FKCDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQ 191
            :.|.:|...||..:.||.|.|:|| .|:..:.:...:|..|..::.|.                 
Human   202 YVCKLCGKTFPRTSSLNRHVRIHT-AEKTYECKQCGKAFIDFSSLTSH----------------- 248

  Fly   192 IQIVSSDTLEPVQQSVMQQQQHESKASKCINCGSSMLQQS-------KRKGPKQVRCESCMQAEQ 249
               :.|.|.|              |..||..||.:....|       ...|.|..:|:.|.:|..
Human   249 ---LRSHTGE--------------KPYKCKECGKAFSYSSTFRRHTITHTGEKPYKCKECAEAFS 296

  Fly   250 TAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKRNSQ 314
            .:...::..::..|:..|             :.::...|.:..:..:|...:.:|..|.      
Human   297 YSSTFRRHMISHTGEKPH-------------KCKECGEAFSYSSAFRRHMITHTGEKPY------ 342

  Fly   315 QMTKCQKCNGSGVVLVGQHSHAS-HSGVGGSVKQSVTVKTECLSC----------------RNPS 362
               :|::|..:.:.|.....|.. |:|         ....||..|                ....
Human   343 ---ECKQCGKTFIYLQSFRRHERIHTG---------EKPYECKQCGKTFIYPQSFRRHERTHGGE 395

  Fly   363 KPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCG 427
            ||:.||.||..||..||...|.::|:|||.|:|..||..|...:.|:.|.|.||.||||:|:.||
Human   396 KPYECNQCGKAFSHPSSFRGHMRVHTGEKPYECKQCGKTFNWPISLRKHMRTHTREKPYECKQCG 460

  Fly   428 MQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHL 492
            ..||.|...:.|.|.|..::.|.|.:|.|.|..|.:|..|.|.||.||.|||:.||.|||....|
Human   461 KAFSLSACFREHVRMHPEDKSYECKLCGKAFYCHISLQKHMRRHTAEKLYKCKQCGKAFSWPELL 525

  Fly   493 KNHA----------------------------KVHSGEKPYKCEICSAAFADRFALKRHRGIH 527
            :.|.                            ::|:|||||:|:.|..||....:|:||..||
Human   526 QQHVRTHTVEKPYECKECGKVFKWPSSLPIHMRLHTGEKPYQCKHCGKAFNCSSSLRRHVRIH 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 61/166 (37%)
C2H2 Zn finger 367..387 CDD:275368 9/19 (47%)
C2H2 Zn finger 395..415 CDD:275368 7/19 (37%)
zf-H2C2_2 407..432 CDD:463886 13/24 (54%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
C2H2 Zn finger 451..471 CDD:275368 8/19 (42%)
COG5048 475..>529 CDD:227381 26/81 (32%)
C2H2 Zn finger 479..499 CDD:275368 8/47 (17%)
C2H2 Zn finger 507..527 CDD:275368 7/19 (37%)
ZNF555XP_011526018.1 KRAB 5..46 CDD:460171
C2H2 Zn finger 151..168 CDD:275368
C2H2 Zn finger 176..196 CDD:275368
COG5048 200..597 CDD:227381 119/453 (26%)
C2H2 Zn finger 204..224 CDD:275368 8/19 (42%)
C2H2 Zn finger 232..252 CDD:275368 3/39 (8%)
C2H2 Zn finger 260..280 CDD:275368 4/19 (21%)
C2H2 Zn finger 288..308 CDD:275368 3/19 (16%)
C2H2 Zn finger 316..336 CDD:275368 2/19 (11%)
C2H2 Zn finger 344..364 CDD:275368 4/19 (21%)
C2H2 Zn finger 372..392 CDD:275368 2/19 (11%)
C2H2 Zn finger 400..420 CDD:275368 9/19 (47%)
C2H2 Zn finger 428..448 CDD:275368 7/19 (37%)
C2H2 Zn finger 456..476 CDD:275368 8/19 (42%)
C2H2 Zn finger 484..504 CDD:275368 8/19 (42%)
C2H2 Zn finger 512..532 CDD:275368 8/19 (42%)
C2H2 Zn finger 540..560 CDD:275368 0/19 (0%)
C2H2 Zn finger 568..588 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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