Protein Alignment Clamp and LOC1278927

DIOPT Version :10

• Sequence 1: NP_001014498.1
• Gene: Clamp / 35445
• FlyBaseID: FBgn0032979
• Length: 566
• Species: Drosophila melanogaster
• Sequence 2: XP_061512762.1
• Gene: LOC1278927 / 1278927
• VectorBaseID: AGAMI1_009459
• Length: 1163
• Species: Anopheles gambiae
• Alignment Length: 443
• Identity: 119/443 - (26%)
• Similarity: 172/443 - (38%)
• Gaps: 105/443 - (23%)

  Fly   127 FKCDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQ 191
            |:|..|...|.....|..|.|:|| ||...|..:            ..:...:.:::..:
Mosquito   258 FQCSYCQKKFTRKEHLTNHVRLHT-GETPFQCSY------------CQKKFTRKEHLTYH----- 304

  Fly   192 IQIVSSDTLEPVQQSVMQ----QQQHESK---------ASKCINCGSSMLQQSK-------RKGP 236
            :::.:.:|  |.|.|..|    :::|.:.         ..:|..|.....::..       ..|.
Mosquito   305 VRLHTGET--PFQCSYCQKKFTRKEHLTNHVRLHTGETPYQCTYCDKKFTRKEHLTNHVRIHTGE 367

  Fly   237 KQVRCESCMQAEQTAQQQQQLFVAQDGQMAHPVQIISTTP----------QAQAQLQQIVAAQTG 291
            ...||..|          ::.|..::....|.......||          ..:..|...|...||
Mosquito   368 TPYRCTYC----------EKKFTRKERLTYHIRWHTGETPYHCTYCEKKFARKEHLTNHVRLHTG 422

  Fly   292 GTTPKREASSGSGHHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTECL 356
            .|                   ..|.|.|:|                    ..|.::.:|:.|.
Mosquito   423 ET-------------------PYQCTYCEK--------------------KFSRRERLTIHTR-- 446

  Fly   357 SCRNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPY 421
             ......|::|..|...|||...|..|.:||:||..|:|:.|...|.:..:|.||.|:||||.||
Mosquito   447 -IHTGETPYACTYCDKKFSRKERLTYHIRLHTGETPYQCTYCEKKFTRKEHLTNHVRLHTGETPY 510

  Fly   422 KCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAF 486
            .|..|..:|::..||.||.|.|:||.||.|..|||.|.|...|.||.|:||||.||.|..|...|
Mosquito   511 PCTYCEKKFTRKEHLTNHVRLHTGETPYQCTYCDKKFTRKEHLTNHTRLHTGETPYHCTYCEKKF 575

  Fly   487 SQAAHLKNHAKVHSGEKPYKCEICSAAFADRFALKRHRGIHQKYGQTAPRQTS 539
            .:..|||||.::|:||.||:|..|...|..:..|..|..:|.  |:| |.|.|
Mosquito   576 MRKEHLKNHIRLHTGETPYQCTYCQKKFTRKEHLTNHTRLHT--GET-PYQCS 625

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clamp	NP_001014498.1	COG5048	<359..498	CDD:227381	63/138 (46%)
		C2H2 Zn finger	367..387	CDD:275368	7/19 (37%)
		C2H2 Zn finger	395..415	CDD:275368	7/19 (37%)
		zf-H2C2_2	407..432	CDD:463886	13/24 (54%)
		C2H2 Zn finger	423..443	CDD:275368	8/19 (42%)
		C2H2 Zn finger	451..471	CDD:275368	10/19 (53%)
		COG5048	475..>529	CDD:227381	21/53 (40%)
		C2H2 Zn finger	479..499	CDD:275368	8/19 (42%)
		C2H2 Zn finger	507..527	CDD:275368	5/19 (26%)
LOC1278927	XP_061512762.1	None