Protein Alignment Clamp and LOC1269320

DIOPT Version :10

• Sequence 1: NP_001014498.1
• Gene: Clamp / 35445
• FlyBaseID: FBgn0032979
• Length: 566
• Species: Drosophila melanogaster
• Sequence 2: XP_307943.5
• Gene: LOC1269320 / 1269320
• VectorBaseID: AGAMI1_000406
• Length: 473
• Species: Anopheles gambiae
• Alignment Length: 386
• Identity: 93/386 - (24%)
• Similarity: 148/386 - (38%)
• Gaps: 88/386 - (22%)

  Fly   195 VSSDTLEPVQQSVMQQQQHESKASKCINCGSSMLQQSKRKGPKQ--------------VRCESCM 245
            |.||..|.|:   :.:|..|.|..:     |..::||....|..              :.|..|.
Mosquito   102 VQSDDDEKVK---VDEQHGEIKWEQ-----SGEVEQSGDANPTARMLSVDALPTIRICMECAVCG 158

  Fly   246 QA------------EQTAQQQQQLFVAQDGQMAHPVQIIST----------TPQAQAQLQQIVAA 288
            :.            ::.::::|..|  ::...:.|:.:|.|          .|:...:....:..
Mosquito   159 ETFNNLQDADLHTHDEVSEEEQPPF--KESSNSSPMLVIETIGTEHIHADAAPEESDEPGDSMYT 221

  Fly   289 QTGGTTP------KREASSGSGHHPVKKRNSQQMTKCQKCNGS--GVVLVGQHSHASHSGVGGSV 345
            :.|...|      |.|..:|....|.:.|.    ..|..|..:  ..|.:.:|...||.   ..:
Mosquito   222 EDGCVQPYYKTEMKDEEEAGDETRPEQNRR----MACFYCEATFEDKVSLKEHFKTSHP---IDL 279

  Fly   346 KQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKN 410
            ::::                 |.:||......::|.||...|..|....||:|...|.:...|:.
Mosquito   280 EKNI-----------------CKVCGLTMKTRAALASHLGKHVRESQLTCSVCSKKFTQKTSLQR 327

  Fly   411 HARIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEK 475
            |..||||||.|:|..||.|:........|:..|...|...|.:|...|..::.|..|.|.|:|||
Mosquito   328 HMAIHTGEKAYQCDQCGKQYIHYSSFYMHQLAHKDVRAKKCTICGNSFTSNSHLKRHMRTHSGEK 392

  Fly   476 PYKCEICGSAFSQAAHLKNHAKVHSGE-----KPYKCEICSAAFADRFA-LKRHRGIHQKY 530
            |:.|.:||..|||..::..|...|||:     |..||..|... :||:. ||:|.   :||
Mosquito   393 PFDCPVCGQKFSQRYNMVQHLNAHSGKAKRSVKMLKCPHCDQC-SDRYTQLKKHL---EKY 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clamp	NP_001014498.1	COG5048	<359..498	CDD:227381	46/138 (33%)
		C2H2 Zn finger	367..387	CDD:275368	6/19 (32%)
		C2H2 Zn finger	395..415	CDD:275368	6/19 (32%)
		zf-H2C2_2	407..432	CDD:463886	13/24 (54%)
		C2H2 Zn finger	423..443	CDD:275368	5/19 (26%)
		C2H2 Zn finger	451..471	CDD:275368	6/19 (32%)
		COG5048	475..>529	CDD:227381	21/59 (36%)
		C2H2 Zn finger	479..499	CDD:275368	7/19 (37%)
		C2H2 Zn finger	507..527	CDD:275368	7/20 (35%)
LOC1269320	XP_307943.5	None