DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and IKZF1

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_011513360.1 Gene:IKZF1 / 10320 HGNCID:13176 Length:563 Species:Homo sapiens


Alignment Length:358 Identity:82/358 - (22%)
Similarity:145/358 - (40%) Gaps:47/358 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 GSSMLQQSKRKGPKQVRCESCMQAEQTAQQQQQLFVAQDGQMAHPVQIISTTPQAQ--AQLQQIV 286
            |..|.|.|.::.|..  .::..:.::.....:.|.....||.:.....:..|..|.  .....|:
Human    30 GQDMSQVSGKESPPV--SDTPDEGDEPMPIPEDLSTTSGGQQSSKSDRVVVTYGADDFRDFHAII 92

  Fly   287 AAQTGGTTPKREASSGSGHHPVKKRNSQQMTK-CQKCNGSGVVLVGQH---SHASHSGVGGSVKQ 347
            ......:..|.|..|...:....:.|.::..: .:..:.||..:.|.|   ..::.|||||    
Human    93 PKSFSPSNVKVETQSDEENGRACEMNGEECAEDLRMLDASGEKMNGSHRDQGSSALSGVGG---- 153

  Fly   348 SVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHA 412
                      .|.|:....|:|||.:....:.|..||:.|:||:.::|:.||.:|.:...|..|.
Human   154 ----------IRLPNGKLKCDICGIICIGPNVLMVHKRSHTGERPFQCNQCGASFTQKGNLLRHI 208

  Fly   413 RIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPY 477
            ::|:||||:||..|.....:...|..|.||||..:|:.||.|.:.:.:.::|..|:.        
Human   209 KLHSGEKPFKCHLCNYACRRRDALTGHLRTHSVGKPHKCGYCGRSYKQRSSLEEHKE-------- 265

  Fly   478 KCE-------ICGSAFSQAAHLKNHAKVHSGEKPYKCEICS--AAFADRFA---LKRHRGIHQKY 530
            :|.       :.|:.:.......||:::...    .|:|.|  :...||.|   .||...:.||:
Human   266 RCHNYLESMGLPGTLYPVIKEETNHSEMAED----LCKIGSERSLVLDRLASNVAKRKSSMPQKF 326

  Fly   531 -GQTAPRQTSSDGMIVHKQEIPDMEDEAQQEVI 562
             |......|..|....:::|...|:.....:.|
Human   327 LGDKGLSDTPYDSSASYEKENEMMKSHVMDQAI 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 42/145 (29%)
C2H2 Zn finger 367..387 CDD:275368 7/19 (37%)
zf-H2C2_2 379..403 CDD:290200 9/23 (39%)
C2H2 Zn finger 395..415 CDD:275368 6/19 (32%)
zf-H2C2_2 407..432 CDD:290200 10/24 (42%)
C2H2 Zn finger 423..443 CDD:275368 5/19 (26%)
zf-H2C2_2 435..460 CDD:290200 10/24 (42%)
C2H2 Zn finger 451..471 CDD:275368 5/19 (26%)
zf-H2C2_2 464..488 CDD:290200 4/30 (13%)
COG5048 475..>529 CDD:227381 12/65 (18%)
C2H2 Zn finger 479..499 CDD:275368 4/26 (15%)
zf-H2C2_2 491..515 CDD:290200 5/25 (20%)
C2H2 Zn finger 507..527 CDD:275368 8/24 (33%)
IKZF1XP_011513360.1 C2H2 Zn finger 163..183 CDD:275368 7/19 (37%)
zf-H2C2_2 176..200 CDD:372612 10/23 (43%)
COG5048 187..>343 CDD:227381 43/167 (26%)
C2H2 Zn finger 191..211 CDD:275368 6/19 (32%)
zf-H2C2_2 203..228 CDD:372612 10/24 (42%)
C2H2 Zn finger 219..239 CDD:275368 5/19 (26%)
C2H2 Zn finger 247..268 CDD:275368 5/28 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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