DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Zfp729b

DIOPT Version :10

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001388788.1 Gene:Zfp729b / 100416706 MGIID:2145180 Length:1055 Species:Mus musculus


Alignment Length:436 Identity:133/436 - (30%)
Similarity:195/436 - (44%) Gaps:56/436 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 FKCDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQ 191
            :||:||...|.|.:.|:.||::|:     :::.:..:..|.:....|   |:.....:..|:   
Mouse   170 YKCEVCGKAFQHPSRLSRHKKIHS-----EEKPYKCEVCGKAFHFPS---LLLVHKRVHTGE--- 223

  Fly   192 IQIVSSDTLEPVQQSVMQQQQH-------------ESKASKCINCG-----SSMLQQSK--RKGP 236
                     :|.:..|..:..|             ..|..||..||     ||.|.:.|  .:|.
Mouse   224 ---------KPYKCEVCGKAFHYPSILSKHKRIHTGEKPYKCEECGKAFHISSFLSKHKIIHRGE 279

  Fly   237 KQVRCESCMQAEQTAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASS 301
            |..:||.|.:|.....:..........:..:..:|.....:..:.|.:.....|.....|.|...
Mouse   280 KPYKCEVCGKAFHYPSRLSNHKKIHSVEKPYKCEICGKAFRILSLLSKHKIIHTEENPYKCEVCG 344

  Fly   302 GSGHHP------VKKRNSQQMTKCQKCNGS--GVVLVGQHS--HASHSGVGGSVKQSVTVKTECL 356
            .:..:|      .|....::..||:.|..:  .:..:.:|.  |...:.....:..:..|....|
Mouse   345 KAFDYPSRLSTHAKMHTGEKPYKCEVCEKAFRSLSSLSKHRRIHMGDNYYNSELCSNAFVYPSRL 409

  Fly   357 S-----CRNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHT 416
            |     ||. .||:.|.:||..|...|.|..|:.:|:|||.|||.:||.||.....|..|.||||
Mouse   410 SKHKKICRG-EKPYKCEVCGKAFHVSSLLSKHRTIHTGEKLYKCEVCGKAFYYPSRLSTHKRIHT 473

  Fly   417 GEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEI 481
            |||||||:.||..|...|.|..|:|.|:||:||.|..|.|.|...::|..|::|||||||||||:
Mouse   474 GEKPYKCEVCGKAFCFPPSLSKHKRIHTGEKPYKCKECGKAFRFPSSLSAHKKIHTGEKPYKCEV 538

  Fly   482 CGSAFSQAAHLKNHAKVHSGEKPYKCEICSAAFADRFALKRHRGIH 527
            ||.||...:.|..|..:|:|||||||:||..||.....|..|:.||
Mouse   539 CGKAFHYPSLLSKHKIIHTGEKPYKCDICDQAFHVPSKLSHHKIIH 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 69/138 (50%)
C2H2 Zn finger 367..387 CDD:275368 7/19 (37%)
C2H2 Zn finger 395..415 CDD:275368 8/19 (42%)
zf-H2C2_2 407..432 CDD:463886 16/24 (67%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
COG5048 475..>529 CDD:227381 28/53 (53%)
C2H2 Zn finger 479..499 CDD:275368 8/19 (42%)
C2H2 Zn finger 507..527 CDD:275368 7/19 (37%)
Zfp729bNP_001388788.1 KRAB 15..73 CDD:214630
C2H2 Zn finger 88..136 CDD:275368
SFP1 <96..207 CDD:227516 11/41 (27%)
C2H2 Zn finger 144..164 CDD:275368
C2H2 Zn finger 172..192 CDD:275368 8/19 (42%)
C2H2 Zn finger 200..220 CDD:275368 3/22 (14%)
COG5048 224..653 CDD:227381 119/362 (33%)
C2H2 Zn finger 228..248 CDD:275368 2/19 (11%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
C2H2 Zn finger 284..304 CDD:275368 4/19 (21%)
C2H2 Zn finger 312..332 CDD:275368 2/19 (11%)
C2H2 Zn finger 340..360 CDD:275368 3/19 (16%)
C2H2 Zn finger 368..388 CDD:275368 3/19 (16%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
C2H2 Zn finger 452..472 CDD:275368 8/19 (42%)
COG5048 476..889 CDD:227381 56/109 (51%)
C2H2 Zn finger 480..500 CDD:275368 8/19 (42%)
C2H2 Zn finger 508..528 CDD:275368 6/19 (32%)
C2H2 Zn finger 536..556 CDD:275368 8/19 (42%)
C2H2 Zn finger 564..584 CDD:275368 7/19 (37%)
C2H2 Zn finger 592..612 CDD:275368
C2H2 Zn finger 620..640 CDD:275368
C2H2 Zn finger 648..668 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 705..724 CDD:275368
C2H2 Zn finger 732..752 CDD:275368
C2H2 Zn finger 760..780 CDD:275368
C2H2 Zn finger 788..808 CDD:275368
C2H2 Zn finger 816..836 CDD:275368
C2H2 Zn finger 844..864 CDD:275368
C2H2 Zn finger 872..892 CDD:275368
C2H2 Zn finger 900..920 CDD:275368
C2H2 Zn finger 928..948 CDD:275368
SFP1 <950..1029 CDD:227516
C2H2 Zn finger 956..976 CDD:275368
C2H2 Zn finger 984..1004 CDD:275368
C2H2 Zn finger 1012..1032 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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