DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and Zfp958

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_038944925.1 Gene:Zfp958 / 100302405 RGDID:2311392 Length:495 Species:Rattus norvegicus


Alignment Length:433 Identity:130/433 - (30%)
Similarity:184/433 - (42%) Gaps:97/433 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 CSDMFPHLALLNAHKRMHTDGEQQQ--QQQHNAQAGGDSIAVVSAQGLVQAQNIIGNGQMGQIQI 194
            |.:.|.|.:.|.||:|.|| ||:..  .|...|.|...|:.:                       
  Rat    80 CGEAFAHRSSLRAHERTHT-GEKPYGCNQCDKAFAYHSSLRI----------------------- 120

  Fly   195 VSSDTLEPVQQSVMQQQQHE-SKASKCINCGSSM-----LQQSKR--KGPKQVRCESCMQAEQTA 251
                          .::.|. .|..|||.||.:.     ||:.||  ...|..:|..|.:|    
  Rat   121 --------------HERTHTGEKLYKCIQCGKAFSDQNTLQRHKRTHSEEKPCKCNQCGKA---- 167

  Fly   252 QQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPVKKRNSQQM 316
                  |........|........|....|..:..|..   ::.:|...:.:|..|.        
  Rat   168 ------FAHHSSLRKHERTHTGEKPYGCNQCDKAFACH---SSLRRHERTHTGEKPY-------- 215

  Fly   317 TKCQKCNGSGVVLVGQHSH-ASHSGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSL 380
             :|.:|:.:.........| .:|:|                     .||:.||.|...|:.:|||
  Rat   216 -ECNQCDKAFAYHSSLQKHERTHTG---------------------EKPYGCNQCDKAFACHSSL 258

  Fly   381 WSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSG 445
            ..|::.|:|||.|:|:.||.|||....|:.|.|||||||||:|..||..||....|:.|||||:|
  Rat   259 RKHERTHTGEKPYECNQCGKAFACHSTLRKHERIHTGEKPYECNQCGKAFSMQNTLRVHERTHTG 323

  Fly   446 ERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHSGEKPYKCEIC 510
            |:|:.|..|.|.|..|:.|..|:|:||||||::|:.||..|:..:..:.|.:||||||||.|..|
  Rat   324 EKPFECNQCGKTFKLHSQLRIHKRVHTGEKPHECDQCGKTFACPSSFQKHKRVHSGEKPYGCNQC 388

  Fly   511 SAAFADRFALKRHRGIHQ-----KYGQTAPRQTSSDGMIVHKQ 548
            ..|||....|::|...|.     |..|.....:.|:.:.|||:
  Rat   389 DKAFAIHSRLRKHERTHTGEKPFKCNQCGKTFSQSNSLQVHKR 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 65/138 (47%)
C2H2 Zn finger 367..387 CDD:275368 8/19 (42%)
zf-H2C2_2 379..403 CDD:290200 12/23 (52%)
C2H2 Zn finger 395..415 CDD:275368 9/19 (47%)
zf-H2C2_2 407..432 CDD:290200 15/24 (63%)
C2H2 Zn finger 423..443 CDD:275368 9/19 (47%)
zf-H2C2_2 435..460 CDD:290200 13/24 (54%)
C2H2 Zn finger 451..471 CDD:275368 8/19 (42%)
zf-H2C2_2 464..488 CDD:290200 13/23 (57%)
COG5048 475..>529 CDD:227381 23/58 (40%)
C2H2 Zn finger 479..499 CDD:275368 5/19 (26%)
zf-H2C2_2 491..515 CDD:290200 12/23 (52%)
C2H2 Zn finger 507..527 CDD:275368 7/19 (37%)
Zfp958XP_038944925.1 KRAB 4..44 CDD:396083
C2H2 Zn finger 80..97 CDD:275368 7/16 (44%)
C2H2 Zn finger 105..125 CDD:275368 4/56 (7%)
COG5048 129..490 CDD:227381 114/346 (33%)
C2H2 Zn finger 133..153 CDD:275368 8/19 (42%)
C2H2 Zn finger 161..181 CDD:275368 5/29 (17%)
C2H2 Zn finger 189..209 CDD:275368 3/22 (14%)
C2H2 Zn finger 217..237 CDD:275368 3/19 (16%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
C2H2 Zn finger 301..321 CDD:275368 9/19 (47%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 5/19 (26%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
C2H2 Zn finger 413..433 CDD:275368 5/19 (26%)
C2H2 Zn finger 441..461 CDD:275368
C2H2 Zn finger 469..489 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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