DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clamp and ikzf2

DIOPT Version :9

Sequence 1:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_017213106.1 Gene:ikzf2 / 100150224 ZFINID:ZDB-GENE-100922-169 Length:499 Species:Danio rerio


Alignment Length:303 Identity:70/303 - (23%)
Similarity:113/303 - (37%) Gaps:76/303 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 EASSG----SGHHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSC 358
            |.|:|    :|....:|.||:.:........:     ||.||:..|....::||....:.|  :.
Zfish     2 ETSNGYIESNGDCSPRKENSRMLVDLSTSTPN-----GQRSHSPQSPAARTIKQEEGTEEE--TE 59

  Fly   359 RNPSKPFSCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLA------------FAKAVYLKNH 411
            |....|....                  ||||:.     .||.            ......::|.
Zfish    60 RRAGGPDEAG------------------HSGEEG-----SGLEDPMIDSPNNLQDAGPGAEVQNE 101

  Fly   412 ARI------HTGEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRI 470
            ..|      :.|::|::|..||:.|:|..:|..|.:.|:||:|:.|..|.....|...|..|.|.
Zfish   102 TGIRLPNGKYNGDRPFQCNQCGVSFTQKGNLLRHIKLHTGEKPFKCPFCSYACRRRDALTGHLRT 166

  Fly   471 HTGEKPYKCEICGSAFSQAAHLKNH-AKVH-----------SGEKPYKCEICS----------AA 513
            |:..||:||..||.::.|...|:.| .:.|           |...||..|:..          ||
Zfish   167 HSVGKPHKCNYCGRSYKQRTSLEEHKERCHNYLQSVGMDSASNPGPYPGEVPKEQRPLEPAGMAA 231

  Fly   514 FADRFALKRHRGIHQKYGQTAPRQTSSDGMIVHKQEIPDMEDE 556
            |.....::|.:|...|...|.|::...:.|:  :...|::..|
Zfish   232 FDRPPVIERLQGNVGKRKSTTPQKFVGEKMV--RYSYPELNYE 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 39/157 (25%)
C2H2 Zn finger 367..387 CDD:275368 0/19 (0%)
zf-H2C2_2 379..403 CDD:290200 6/35 (17%)
C2H2 Zn finger 395..415 CDD:275368 4/37 (11%)
zf-H2C2_2 407..432 CDD:290200 8/30 (27%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 435..460 CDD:290200 8/24 (33%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
zf-H2C2_2 464..488 CDD:290200 10/23 (43%)
COG5048 475..>529 CDD:227381 19/75 (25%)
C2H2 Zn finger 479..499 CDD:275368 6/20 (30%)
zf-H2C2_2 491..515 CDD:290200 9/45 (20%)
C2H2 Zn finger 507..527 CDD:275368 6/29 (21%)
ikzf2XP_017213106.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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