DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42748 and Ajm1

DIOPT Version :9

Sequence 1:NP_001260684.1 Gene:CG42748 / 35442 FlyBaseID:FBgn0261802 Length:2190 Species:Drosophila melanogaster
Sequence 2:XP_006233715.1 Gene:Ajm1 / 362083 RGDID:1560470 Length:974 Species:Rattus norvegicus


Alignment Length:1106 Identity:256/1106 - (23%)
Similarity:375/1106 - (33%) Gaps:289/1106 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1151 HVHSWQQQEQLGKTSTLQKVTGKPPLPKMPPRSGILTHAPQETTGETVNCHRTEALPSVEREHCN 1215
            |..|:...|.|.: .|::.....||....|||:     .|::  ||.....|:::.|.|.:    
  Rat    49 HCRSFDFLEALDE-PTMETHPEPPPPEPAPPRA-----RPRD--GEPRRRTRSKSAPRVPQ---- 101

  Fly  1216 QLT---------------GQLVAKVQAQRMRDTGLSSQIVVAEETHTVNRLAGHGDATRPTVVTA 1265
            .||               .|...:|:....|:....:...:|.|.|.:......|...|...:.|
  Rat   102 SLTTAPASPPVLQRRGREAQRAVRVEGSPCREPSYPALRALANELHPIKLQPQRGGPGRIAPLCA 166

  Fly  1266 VPVSVA-PVAEVDKMGLIETNLD--THETVISGKTRSLMDITCNPLSMPHKRYIVKRLNVNSVAY 1327
            .|...| |.:....:..:...||  ..|.|:....||      :....|.:        .:|.|.
  Rat   167 TPGRCAPPESSAGPVPHVRCRLDIKPDEAVLQHAARS------SRSGAPRE--------TSSWAR 217

  Fly  1328 DVDELDAEVKPSPGGMASVRRPHKSMEFLLDKENQKNILPPENELQKSHDHNPGALSEHQLRVQA 1392
            .|.:......|.|..:|..|.|..|..:..|...    |..:..|....|:     .||  |.|.
  Rat   218 TVPQFHGLTVPGPRHVALSRTPTPSDLYCTDPRP----LYCDGPLPGPRDY-----LEH--RTQP 271

  Fly  1393 SLQRLNIPDWFRHYNKGPEKAADGENACTSATGGGYRPGNFTRKRAQESGRWQGLNSKTTSLSSL 1457
            .........:|  |.:.||               || .|:||   |.....:.|..|:       
  Rat   272 FTTPPGPTQFF--YTEEPE---------------GY-AGSFT---ASPGLPFDGYCSR------- 308

  Fly  1458 GSQRSDRSPLLMS--PSAHSHHGGQSSYSCGSTTIHGPAPVQIGMGATRWSTSHLNSTQMSPGAS 1520
                    |.|..  |......||  ||..|.....   |:                 |..|..|
  Rat   309 --------PYLSEEPPRPSPRRGG--SYYAGEVRTF---PI-----------------QEPPSRS 343

  Fly  1521 QRGSFTR--GAPINSSFI----SVASGSGLLRNSYRQPYLGWRSTEKLSQRTPHERLA------- 1572
            ..|..||  |.|....::    .|..|:   |..|.:.:..:|..:.|::..||.|.:       
  Rat   344 YYGETTRAYGLPFVPRYVPEEPRVHPGA---RAFYTEDFGRYRERDALARTYPHPRSSPTWADWG 405

  Fly  1573 -NSLLTQRTAPP--------STRAGNETRTLHSVSTEIQSSIKEVTSAIVHFVNDQQQSQHPRSR 1628
             ....|.:..||        |...|..|           |..:.||           .|:|    
  Rat   406 PRPYRTLQVMPPPAPGPLLASWHGGTGT-----------SPPRLVT-----------DSRH---- 444

  Fly  1629 STSPNSRCWLESSFVGTRTLDSPQTPVIDNSPPELARKQQQLHPHQVHLDVGLSP-------VVS 1686
                .||.|......|.|..|          |....|..:.|...:|....|.||       ||:
  Rat   445 ----YSRSWDNILAPGPRRED----------PLGRGRSYENLLGREVRDTRGSSPEGRRPPVVVN 495

  Fly  1687 AGQLPHRMNGINRIGNGGVPTRNIAPERSLSSASLEDV--LASLLG---LPTTLLSGQNSNSYSS 1746
            ....|.|...:                 |||..||.:.  ....||   ..|..::..:::..|:
  Rat   496 LSTSPRRYAAL-----------------SLSETSLTEKGRTGECLGRNWYVTPEITITDNDLRSA 543

  Fly  1747 YTPNAATTACAASRQQLEVQSAAELQRLRRRSEGDAPTQEKHYSKEQSHKSNSHSVEAVDSAQPN 1811
            ..|.|........|.:..|....|           .|...:..|.||..:..:..|  :||..|.
  Rat   544 ERPTAKGWELPGGRPRQPVPVVPE-----------GPASSRQRSLEQLDELITDLV--IDSRSPA 595

  Fly  1812 NPKESRRASL----------------GDPALAATRS---DIGSGQLQLIEGPTTGFGSGQH---- 1853
            ...|.....|                |..|||.:||   ..||     .|.||   |||:.    
  Rat   596 QAPEPTAEGLGRQLRRLLDSRPAGPGGATALAPSRSPPASAGS-----TEEPT---GSGEAAEAS 652

  Fly  1854 ----------VRCRNTKCDQSTSPSDAKKLYKSCHNCSHLYCSRECRRAHWEKHRKACLHSRASN 1908
                      :.|.|.:|.::.:..:|...:||||:|...||||.|||..|:.|:..|::.|..:
  Rat   653 PEPSADEDDLMTCSNARCRRTETMFNACLYFKSCHSCYTYYCSRLCRREDWDAHKARCVYGRVGS 717

  Fly  1909 ICRQVLATCKDDIDSQRHLSLLARKGSLSQGRGVVRVLFRSAEAAEGFIKNGFQ-CMGEASYVRW 1972
            :||.||..|:|.....|..|.:||.|.||:||||:.:.|.|..:|:.|::.|.: .:...:|:..
  Rat   718 VCRHVLQFCRDSSPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSL 782

  Fly  1973 PDLMPAEMGLELYS-ELLKLSTEYKPETKMLIYVAICVVSEA--PGMGQAPV-RWERQLVSRCAK 2033
            .:|......|..|: ||......|:|....|:.|::.|...|  ||....|. |.....|.:.||
  Rat   783 RELATHAAPLGSYARELAAAGRLYEPAECFLLSVSVAVGPGAAPPGAAARPAPRSPGPTVRKFAK 847

  Fly  2034 LKLCKTVLAELEQHQAALLQPVSVVAVPERTEILILTFNPGQ----------HSNRELILSNILD 2088
            :.|.          ..:..:|..........|.||||..||.          ...||:...:|..
  Rat   848 VALA----------AGSPTRPPPARGGEPDMETLILTPPPGTAGLDEEGEAGRRAREVAFIHIQR 902

  Fly  2089 ILSRRGVMLSKHYPEVFERLQTYSEGQSDKFNPVTLHPRDTQTGQNFVCIIMAVHTDNELTKLPS 2153
            .|..|||.|...:|.|:|:|..:.|. :.:|.|.|::|.|.:||:.|:|:|||......|..:.|
  Rat   903 ELRLRGVFLRHEFPRVYEQLCEFVEA-NRRFTPTTIYPTDRRTGRPFMCMIMAASEPRALDWVAS 966

  Fly  2154 A 2154
            |
  Rat   967 A 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42748NP_001260684.1 zf-MYND 1870..1901 CDD:280009 15/30 (50%)
Ajm1XP_006233715.1 PHA03378 <91..>187 CDD:223065 17/99 (17%)
zf-MYND 668..710 CDD:396356 16/41 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004438
OrthoInspector 1 1.000 - - oto95721
orthoMCL 1 0.900 - - OOG6_110177
Panther 1 1.100 - - LDO PTHR21517
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.000

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