DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm3 and CPL2

DIOPT Version :10

Sequence 1:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001190199.1 Gene:CPL2 / 831743 AraportID:AT5G01270 Length:774 Species:Arabidopsis thaliana


Alignment Length:244 Identity:48/244 - (19%)
Similarity:81/244 - (33%) Gaps:99/244 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 PQMARLLPNVVPPPYIQPPYSLVLEIKD--VLVHPDWTYQTGWRFKKRPGVD----YFLQQCSRN 179
            |:...:|..:.|            ||:|  |||            |.||..:    |...:..:.
plant   236 PEKNTVLTRIKP------------EIRDTSVLV------------KLRPAWEELRSYLTAKTRKR 276

  Fly   180 FEIVIYTSEQGMTAFPLLDALDPYGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPY 244
            ||:.:.|..:...|..:...|||..                 |..:|..| ||  |::.|..|..
plant   277 FEVYVCTMAERDYALEMWRLLDPEA-----------------HLISLKEL-RD--RIVCVKPDAK 321

  Fly   245 TTPL--------HPDNSLVLTKWLGNDDDVQLFD---------LTAFL---------QLIAEHQV 283
            .:.|        ||..::|:      ||.:::::         ::|:|         .|:..|..
plant   322 KSLLSVFNGGICHPKMAMVI------DDRMKVWEDKDQPRVHVVSAYLPYYAPQAETALVVPHLC 380

  Fly   284 ---NDVREVLRYYRQFEDPMEQFKDNQRRLQEQ-----SQESIQNLPTS 324
               |....|..|:         ||:....|...     .::.::|||.|
plant   381 VARNVACNVRGYF---------FKEFDESLMSSISLVYYEDDVENLPPS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm3NP_610130.1 CPDc 138..265 CDD:214729 30/140 (21%)
CPL2NP_001190199.1 HAD_FCP1-like <244..355 CDD:319823 32/160 (20%)
DSRM_RNAse_III_family 657..720 CDD:380682
Blue background indicates that the domain is not in the aligned region.

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