DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm3 and ctdspla

DIOPT Version :10

Sequence 1:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_068073219.1 Gene:ctdspla / 751737 ZFINID:ZDB-GENE-060825-333 Length:303 Species:Danio rerio


Alignment Length:331 Identity:77/331 - (23%)
Similarity:127/331 - (38%) Gaps:95/331 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TCLLSPCEKICLNSARKTVQRCDKNYSPPKLRRIKNFYTYSVVLGSLFS--IVMWAIYKLGKPEE 84
            |.:.:|.|:..|:|.::.|.:     |...|::.:|        .|:||  ...:..|....|..
Zfish     8 TQVANPKEEEILSSCQEKVSQ-----SNSSLKKHRN--------RSIFSPFFCCFRDYNAEPPAT 59

  Fly    85 DHR-----GPIEDEFSQLPWFRQYIMRMWHTLQYYEKMMEEPQMARLLPNVVPP-PYIQPPYSL- 142
            :::     .|.||..|.                      .:....:::|...|| .||.|..|: 
Zfish    60 NNKTCSLPPPAEDNSSS----------------------PKCDQVQVIPIPSPPAKYILPEVSIN 102

  Fly   143 -------VLEIKDVLVHP----------------DWTYQTGWRFK-------------------- 164
                   |:::.:.|||.                |.|....:..|                    
Zfish   103 DYGKNCVVIDLDETLVHSSFKPISNADFIVPVEIDGTVHQVYVLKRPHVDELLFVFLSVIVCLVC 167

  Fly   165 ------KRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDALDPYGYIKYRLVRGATDLVEGQHT 223
                  |||.||.|||:....||.|::|:.....|.|:.|.||.:|..:.||.|.:.....|.:.
Zfish   168 LKVYVLKRPHVDEFLQKMGEMFECVLFTASLAKYADPVADLLDQWGVFRARLFRESCVFHRGNYV 232

  Fly   224 KNLDYLNRDLSRVIVVDCDPYTTPLHPDNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVRE 288
            |:|..|.|:|::||:||..|.:...||:|::.:..|..:..|.:|.||....:.::..  .||..
Zfish   233 KDLSRLGRELNKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLLPLFEGLSRE--TDVYS 295

  Fly   289 VLRYYR 294
            ||:..|
Zfish   296 VLQSLR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm3NP_610130.1 CPDc 138..265 CDD:214729 45/176 (26%)
ctdsplaXP_068073219.1 HIF-SF_euk 106..292 CDD:274055 47/187 (25%)

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